RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 OLFML2BQ68BL8 750 aa21.29■■□□□ 1
USF2-202ENST00000343550 SAMD1Q6SPF0 538 aaPredicted RBP21.29■■□□□ 1
USF2-202ENST00000343550 STAG1Q8WVM7 1258 aa21.29■■□□□ 1
USF2-202ENST00000343550 IL17RBQ9NRM6 502 aa21.29■■□□□ 1
USF2-202ENST00000343550 PLIN4Q96Q06 1357 aa21.29■■□□□ 1
USF2-202ENST00000343550 LAMA3Q16787 3333 aa21.29■■□□□ 1
USF2-202ENST00000343550 TTLL1O95922 423 aa21.29■■□□□ 1
USF2-202ENST00000343550 PCP11498 1178 aaKnown RBP21.29■■□□□ 1
USF2-202ENST00000343550 NCAPG2Q86XI2 1143 aa21.29■■□□□ 1
USF2-202ENST00000343550 TBC1D10CQ8IV04 446 aa21.29■■□□□ 1
USF2-202ENST00000343550 TRPV1Q8NER1 839 aa21.29■■□□□ 1
USF2-202ENST00000343550 TOMM22Q9NS69 142 aa21.29■■□□□ 1
USF2-202ENST00000343550 RLFQ13129 1914 aa21.28■■□□□ 1
USF2-202ENST00000343550 COBLO75128 1261 aa21.28■■□□□ 1
USF2-202ENST00000343550 IMMTQ16891 758 aaKnown RBP21.28■■□□□ 1
USF2-202ENST00000343550 LRRC26Q2I0M4 334 aa21.28■■□□□ 1
USF2-202ENST00000343550 RRP12Q5JTH9 1297 aaKnown RBP21.28■■□□□ 1
USF2-202ENST00000343550 ABRAQ8N0Z2 381 aa21.28■■□□□ 1
USF2-202ENST00000343550 RNF41Q9H4P4 317 aaPredicted RBP21.28■■□□□ 1
USF2-202ENST00000343550 GOPCQ9HD26 462 aa21.28■■□□□ 1
USF2-202ENST00000343550 SLC5A4Q9NY91 659 aa21.28■■□□□ 1
USF2-202ENST00000343550 ADAMTS5Q9UNA0 930 aa21.28■■□□□ 1
USF2-202ENST00000343550 F5H6K3 240 aa21.27■■□□□ 1
USF2-202ENST00000343550 NMT2O60551 498 aa21.27■■□□□ 1
USF2-202ENST00000343550 CYBAP13498 195 aa21.27■■□□□ 1
USF2-202ENST00000343550 KLRC3Q07444 240 aa21.27■■□□□ 1
USF2-202ENST00000343550 TMEM132BQ14DG7 1078 aa21.27■■□□□ 1
USF2-202ENST00000343550 SOX1O00570 391 aaPredicted RBP21.26■□□□□ 0.99
USF2-202ENST00000343550 MAGEA10P43363 369 aaPredicted RBP21.26■□□□□ 0.99
USF2-202ENST00000343550 MAP4K1Q92918 833 aa21.26■□□□□ 0.99
USF2-202ENST00000343550 ESYT1Q9BSJ8 1104 aa21.26■□□□□ 0.99
USF2-202ENST00000343550 SENP6Q9GZR1 1112 aaPredicted RBP21.26■□□□□ 0.99
USF2-202ENST00000343550 FBXO28Q9NVF7 368 aa21.26■□□□□ 0.99
USF2-202ENST00000343550 SYNPO2Q9UMS6 1093 aa21.26■□□□□ 0.99
USF2-202ENST00000343550 A0A0G2JMZ2 1700 aa21.26■□□□□ 0.99
USF2-202ENST00000343550 RAD21O60216 631 aa21.25■□□□□ 0.99
USF2-202ENST00000343550 SLC25A27O95847 323 aa21.25■□□□□ 0.99
USF2-202ENST00000343550 FCER1AP12319 257 aa21.25■□□□□ 0.99
USF2-202ENST00000343550 NOVP48745 357 aa21.25■□□□□ 0.99
USF2-202ENST00000343550 TCP11L1Q9NUJ3 509 aa21.25■□□□□ 0.99
USF2-202ENST00000343550 PPP4R3BQ5MIZ7 849 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 LRCH3Q96II8 777 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 U3KPZ7 1027 aaPredicted RBP21.24■□□□□ 0.99
USF2-202ENST00000343550 NEDD4P46934 1319 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 ZNF236Q9UL36 1845 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 DNM1LO00429 736 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 VWA5AO00534 786 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 FAM83BQ5T0W9 1011 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 KIAA1211Q6ZU35 1233 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 ESR2Q92731 530 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 PPP1R9AQ9ULJ8 1098 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 STX8Q9UNK0 236 aa21.24■□□□□ 0.99
USF2-202ENST00000343550 MYH4Q9Y623 1939 aa21.23■□□□□ 0.99
USF2-202ENST00000343550 SEPT4O43236 478 aa21.23■□□□□ 0.99
USF2-202ENST00000343550 NDUFB10O96000 172 aa21.23■□□□□ 0.99
USF2-202ENST00000343550 STAT3P40763 770 aa21.23■□□□□ 0.99
USF2-202ENST00000343550 RIOX2Q8IUF8 465 aa21.23■□□□□ 0.99
USF2-202ENST00000343550 LRRC47Q8N1G4 583 aaKnown RBP21.23■□□□□ 0.99
USF2-202ENST00000343550 ARRDC4Q8NCT1 418 aa21.23■□□□□ 0.99
USF2-202ENST00000343550 GMCL1P1Q8NEA9 526 aa21.23■□□□□ 0.99
USF2-202ENST00000343550 MAML3Q96JK9 1138 aa21.23■□□□□ 0.99
USF2-202ENST00000343550 LSG1Q9H089 658 aaKnown RBP21.23■□□□□ 0.99
USF2-202ENST00000343550 CDC45O75419 566 aa21.22■□□□□ 0.99
USF2-202ENST00000343550 CYP21A2P08686 494 aa21.22■□□□□ 0.99
USF2-202ENST00000343550 NT5C2P49902 561 aa21.22■□□□□ 0.99
USF2-202ENST00000343550 PRAMEF19Q5SWL8 479 aa21.22■□□□□ 0.99
USF2-202ENST00000343550 MMP19Q99542 508 aa21.22■□□□□ 0.99
USF2-202ENST00000343550 NUP88Q99567 741 aaPredicted RBP21.22■□□□□ 0.99
USF2-202ENST00000343550 UBE2OQ9C0C9 1292 aaKnown RBP21.22■□□□□ 0.99
USF2-202ENST00000343550 ZSWIM5Q9P217 1185 aa21.22■□□□□ 0.99
USF2-202ENST00000343550 DNAH12Q6ZR08 3092 aa21.22■□□□□ 0.99
USF2-202ENST00000343550 LAMA4Q16363 1823 aa21.21■□□□□ 0.99
USF2-202ENST00000343550 ATN1P54259 1190 aaPredicted RBP21.21■□□□□ 0.99
USF2-202ENST00000343550 GJC2Q5T442 439 aaPredicted RBP21.21■□□□□ 0.99
USF2-202ENST00000343550 ANO1Q5XXA6 986 aa21.21■□□□□ 0.99
USF2-202ENST00000343550 TDHQ8IZJ6 230 aa21.21■□□□□ 0.99
USF2-202ENST00000343550 TTC14Q96N46 770 aa21.21■□□□□ 0.99
USF2-202ENST00000343550 ZNF214Q9UL59 606 aaPredicted RBP21.21■□□□□ 0.99
USF2-202ENST00000343550 B4E1Z4 1266 aa21.2■□□□□ 0.98
USF2-202ENST00000343550 KDM4AO75164 1064 aa21.2■□□□□ 0.98
USF2-202ENST00000343550 KCTD2Q14681 263 aa21.2■□□□□ 0.98
USF2-202ENST00000343550 SLFN13Q68D06 897 aa21.2■□□□□ 0.98
USF2-202ENST00000343550 CASC1Q6TDU7 716 aa21.2■□□□□ 0.98
USF2-202ENST00000343550 REPS2Q8NFH8 660 aa21.2■□□□□ 0.98
USF2-202ENST00000343550 KRT23Q9C075 422 aa21.2■□□□□ 0.98
USF2-202ENST00000343550 CNNM2Q9H8M5 875 aa21.2■□□□□ 0.98
USF2-202ENST00000343550 RBM8AQ9Y5S9 174 aaKnown RBP21.2■□□□□ 0.98
USF2-202ENST00000343550 FRMPD3Q5JV73 1810 aa21.2■□□□□ 0.98
USF2-202ENST00000343550 PGK2P07205 417 aa21.19■□□□□ 0.98
USF2-202ENST00000343550 COPB2P35606 906 aa21.19■□□□□ 0.98
USF2-202ENST00000343550 RCSD1Q6JBY9 416 aa21.19■□□□□ 0.98
USF2-202ENST00000343550 SLF1Q9BQI6 1058 aa21.19■□□□□ 0.98
USF2-202ENST00000343550 PARP14Q460N5 1801 aa21.19■□□□□ 0.98
USF2-202ENST00000343550 MDM2Q00987 491 aaPredicted RBP21.19■□□□□ 0.98
USF2-202ENST00000343550 LRIT3Q3SXY7 679 aa21.19■□□□□ 0.98
USF2-202ENST00000343550 TMEM47Q9BQJ4 181 aa21.19■□□□□ 0.98
USF2-202ENST00000343550 ZKSCAN3Q9BRR0 538 aa21.19■□□□□ 0.98
USF2-202ENST00000343550 DIS3Q9Y2L1 958 aaKnown RBP21.19■□□□□ 0.98
USF2-202ENST00000343550 TAF6LQ9Y6J9 622 aa21.19■□□□□ 0.98
USF2-202ENST00000343550 KBTBD13C9JR72 458 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms