RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 CTCFLQ8NI51 663 aaPredicted RBP17.11■□□□□ 0.33
TPM3-208ENST00000341485 CBFA2T2O43439 604 aa17.1■□□□□ 0.33
TPM3-208ENST00000341485 MYO1BO43795 1136 aa17.1■□□□□ 0.33
TPM3-208ENST00000341485 SERPINC1P01008 464 aa17.1■□□□□ 0.33
TPM3-208ENST00000341485 SFPQP23246 707 aaKnown RBP eCLIP17.1■□□□□ 0.33
TPM3-208ENST00000341485 NFIAQ12857 509 aa17.1■□□□□ 0.33
TPM3-208ENST00000341485 MORC3Q14149 939 aa17.1■□□□□ 0.33
TPM3-208ENST00000341485 PTPN14Q15678 1187 aa17.1■□□□□ 0.33
TPM3-208ENST00000341485 SMARCE1Q969G3 411 aa17.1■□□□□ 0.33
TPM3-208ENST00000341485 KAT14Q9H8E8 782 aa17.1■□□□□ 0.33
TPM3-208ENST00000341485 A0A087X0B3 334 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 CACNB3P54284 484 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 E4F1Q66K89 784 aaPredicted RBP17.09■□□□□ 0.33
TPM3-208ENST00000341485 RCSD1Q6JBY9 416 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 OGFOD1Q8N543 542 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 BRMS1Q9HCU9 246 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 BAZ2BQ9UIF8 2168 aaKnown RBP17.09■□□□□ 0.33
TPM3-208ENST00000341485 FMR1Q06787 632 aaKnown RBP eCLIP17.09■□□□□ 0.33
TPM3-208ENST00000341485 TCP10Q12799 353 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 DHX8Q14562 1220 aaKnown RBP17.09■□□□□ 0.33
TPM3-208ENST00000341485 KANK3Q6NY19 840 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 DGKHQ86XP1 1220 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 ZNF592Q92610 1267 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 EPSTI1Q96J88 318 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 SPON1Q9HCB6 807 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 TCP11L1Q9NUJ3 509 aa17.09■□□□□ 0.33
TPM3-208ENST00000341485 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
TPM3-208ENST00000341485 TMEM232C9JQI7 657 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 NFKBIEO00221 500 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 ZNF174Q15697 407 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 VSTM4Q8IW00 320 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 TRIML1Q8N9V2 468 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 MLKLQ8NB16 471 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 NLGN2Q8NFZ4 835 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 SPATA20Q8TB22 786 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 IDI2Q9BXS1 227 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 TDRD3Q9H7E2 651 aaKnown RBP17.08■□□□□ 0.33
TPM3-208ENST00000341485 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 INTS13Q9NVM9 706 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 SWAP70Q9UH65 585 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 SERPINB13Q9UIV8 391 aa17.08■□□□□ 0.33
TPM3-208ENST00000341485 BMP15O95972 392 aa17.08■□□□□ 0.32
TPM3-208ENST00000341485 SCG2P13521 617 aa17.08■□□□□ 0.32
TPM3-208ENST00000341485 VEGFAP15692 232 aaPredicted RBP17.08■□□□□ 0.32
TPM3-208ENST00000341485 TTC38Q5R3I4 469 aa17.08■□□□□ 0.32
TPM3-208ENST00000341485 CIAPIN1Q6FI81 312 aa17.08■□□□□ 0.32
TPM3-208ENST00000341485 ZSCAN29Q8IWY8 852 aaPredicted RBP17.08■□□□□ 0.32
TPM3-208ENST00000341485 CCDC112Q8NEF3 446 aa17.08■□□□□ 0.32
TPM3-208ENST00000341485 ANKRD7Q92527 254 aa17.08■□□□□ 0.32
TPM3-208ENST00000341485 DHX58Q96C10 678 aa17.08■□□□□ 0.32
TPM3-208ENST00000341485 TMOD2Q9NZR1 351 aa17.08■□□□□ 0.32
TPM3-208ENST00000341485 KCNJ6P48051 423 aa17.07■□□□□ 0.32
TPM3-208ENST00000341485 CXCL9Q07325 125 aa17.07■□□□□ 0.32
TPM3-208ENST00000341485 DLGAP5Q15398 846 aa17.07■□□□□ 0.32
TPM3-208ENST00000341485 AGBL3Q8NEM8 1001 aa17.07■□□□□ 0.32
TPM3-208ENST00000341485 NEDD1Q8NHV4 660 aa17.07■□□□□ 0.32
TPM3-208ENST00000341485 SYMPKQ92797 1274 aaKnown RBP17.07■□□□□ 0.32
TPM3-208ENST00000341485 FERMT2Q96AC1 680 aa17.07■□□□□ 0.32
TPM3-208ENST00000341485 MED15Q96RN5 788 aa17.07■□□□□ 0.32
TPM3-208ENST00000341485 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
TPM3-208ENST00000341485 ADAMTS3O15072 1205 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 GABPAQ06546 454 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 PFKFB3Q16875 520 aaPredicted RBP17.06■□□□□ 0.32
TPM3-208ENST00000341485 SH3RF1Q7Z6J0 888 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 ENOX1Q8TC92 643 aaKnown RBP17.06■□□□□ 0.32
TPM3-208ENST00000341485 PRMT6Q96LA8 375 aaPredicted RBP17.06■□□□□ 0.32
TPM3-208ENST00000341485 GMLQ99445 158 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 DACH1Q9UI36 760 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 STX8Q9UNK0 236 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 ZNF18P17022 549 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 NLRP5P59047 1200 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 ATP2C1P98194 919 aaPredicted RBP17.06■□□□□ 0.32
TPM3-208ENST00000341485 RASSF7Q02833 373 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 PTPN21Q16825 1174 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 HSP90AA4PQ58FG1 418 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 ZFPM1Q8IX07 1006 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 TRMT44Q8IYL2 757 aaKnown RBP17.06■□□□□ 0.32
TPM3-208ENST00000341485 PNMA1Q8ND90 353 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 ANKS1AQ92625 1134 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 PPP1R13BQ96KQ4 1090 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 TRIM34Q9BYJ4 488 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 FAM198AQ9UFP1 575 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 NFE2L3Q9Y4A8 694 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 MYH8P13535 1937 aa17.06■□□□□ 0.32
TPM3-208ENST00000341485 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
TPM3-208ENST00000341485 SLFN14P0C7P3 912 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 TNIP1Q15025 636 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 LTBP3Q9NS15 1303 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 SPDYE2BA6NHP3 402 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 SPDYE6P0CI01 402 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 KIF5BP33176 963 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 NCBP1Q09161 790 aaKnown RBP17.05■□□□□ 0.32
TPM3-208ENST00000341485 PTGDRQ13258 359 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 PIK3AP1Q6ZUJ8 805 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 PAGE5Q96GU1 130 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 EHD4Q9H223 541 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 TMX1Q9H3N1 280 aa17.05■□□□□ 0.32
TPM3-208ENST00000341485 NRDCO43847 1150 aa17.04■□□□□ 0.32
TPM3-208ENST00000341485 ENTPD3O75355 529 aa17.04■□□□□ 0.32
TPM3-208ENST00000341485 TOP1P11387 765 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms