RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 TMEM47Q9BQJ4 181 aa26.5■■□□□ 1.83
PBX1-201ENST00000340699 B4E1Z4 1266 aa26.49■■□□□ 1.83
PBX1-201ENST00000340699 GJB1P08034 283 aa26.49■■□□□ 1.83
PBX1-201ENST00000340699 FDX1P10109 184 aa26.49■■□□□ 1.83
PBX1-201ENST00000340699 REPS2Q8NFH8 660 aa26.49■■□□□ 1.83
PBX1-201ENST00000340699 DCAF4Q8WV16 495 aa26.49■■□□□ 1.83
PBX1-201ENST00000340699 FCER1AP12319 257 aa26.48■■□□□ 1.83
PBX1-201ENST00000340699 KCTD1Q719H9 257 aa26.48■■□□□ 1.83
PBX1-201ENST00000340699 ZKSCAN3Q9BRR0 538 aa26.48■■□□□ 1.83
PBX1-201ENST00000340699 TEX13BQ9BXU2 312 aa26.48■■□□□ 1.83
PBX1-201ENST00000340699 SLC5A4Q9NY91 659 aa26.48■■□□□ 1.83
PBX1-201ENST00000340699 ZNF214Q9UL59 606 aaPredicted RBP26.48■■□□□ 1.83
PBX1-201ENST00000340699 ADORA2AP29274 412 aa26.47■■□□□ 1.83
PBX1-201ENST00000340699 TRDNQ13061 729 aa26.47■■□□□ 1.83
PBX1-201ENST00000340699 CCDC96Q2M329 555 aa26.47■■□□□ 1.83
PBX1-201ENST00000340699 SNRNP48Q6IEG0 339 aaKnown RBP26.47■■□□□ 1.83
PBX1-201ENST00000340699 DGKHQ86XP1 1220 aa26.47■■□□□ 1.83
PBX1-201ENST00000340699 ABRAQ8N0Z2 381 aa26.47■■□□□ 1.83
PBX1-201ENST00000340699 CPXCR1Q8N123 301 aa26.47■■□□□ 1.83
PBX1-201ENST00000340699 HMX1Q9NP08 348 aaPredicted RBP26.47■■□□□ 1.83
PBX1-201ENST00000340699 KIAA0100Q14667 2235 aaKnown RBP26.46■■□□□ 1.83
PBX1-201ENST00000340699 RPTORQ8N122 1335 aa26.46■■□□□ 1.83
PBX1-201ENST00000340699 PLA2G6O60733 806 aa26.46■■□□□ 1.83
PBX1-201ENST00000340699 HOXC6P09630 235 aa26.46■■□□□ 1.83
PBX1-201ENST00000340699 GJA8P48165 433 aa26.46■■□□□ 1.83
PBX1-201ENST00000340699 SLC4A3P48751 1232 aa26.46■■□□□ 1.83
PBX1-201ENST00000340699 CCL14Q16627 93 aa26.46■■□□□ 1.83
PBX1-201ENST00000340699 SLC38A10Q9HBR0 1119 aa26.46■■□□□ 1.83
PBX1-201ENST00000340699 ZSWIM5Q9P217 1185 aa26.46■■□□□ 1.83
PBX1-201ENST00000340699 ATP2A1O14983 1001 aa26.45■■□□□ 1.82
PBX1-201ENST00000340699 TRIM32Q13049 653 aa26.45■■□□□ 1.82
PBX1-201ENST00000340699 MFSD14CQ5VZR4 134 aa26.45■■□□□ 1.82
PBX1-201ENST00000340699 ERICH6BQ5W0A0 696 aa26.45■■□□□ 1.82
PBX1-201ENST00000340699 CASC1Q6TDU7 716 aa26.45■■□□□ 1.82
PBX1-201ENST00000340699 MAP4K1Q92918 833 aa26.45■■□□□ 1.82
PBX1-201ENST00000340699 ZSCAN10Q96SZ4 725 aaPredicted RBP26.45■■□□□ 1.82
PBX1-201ENST00000340699 MMP19Q99542 508 aa26.45■■□□□ 1.82
PBX1-201ENST00000340699 ESYT1Q9BSJ8 1104 aa26.45■■□□□ 1.82
PBX1-201ENST00000340699 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.45■■□□□ 1.82
PBX1-201ENST00000340699 CENPFP49454 3210 aa26.44■■□□□ 1.82
PBX1-201ENST00000340699 CYP21A2P08686 494 aa26.44■■□□□ 1.82
PBX1-201ENST00000340699 PRKAR2AP13861 404 aaKnown RBP26.44■■□□□ 1.82
PBX1-201ENST00000340699 OAZ1P54368 228 aa26.44■■□□□ 1.82
PBX1-201ENST00000340699 KCTD2Q14681 263 aa26.44■■□□□ 1.82
PBX1-201ENST00000340699 NPLOC4Q8TAT6 608 aa26.44■■□□□ 1.82
PBX1-201ENST00000340699 U2AF1L4Q8WU68 220 aaKnown RBP26.44■■□□□ 1.82
PBX1-201ENST00000340699 DEFB118Q96PH6 123 aa26.44■■□□□ 1.82
PBX1-201ENST00000340699 UBAC1Q9BSL1 405 aa26.44■■□□□ 1.82
PBX1-201ENST00000340699 RAVER2Q9HCJ3 691 aaKnown RBP26.44■■□□□ 1.82
PBX1-201ENST00000340699 SGPL1O95470 568 aa26.43■■□□□ 1.82
PBX1-201ENST00000340699 CAPN2P17655 700 aa26.43■■□□□ 1.82
PBX1-201ENST00000340699 KAT14Q9H8E8 782 aa26.43■■□□□ 1.82
PBX1-201ENST00000340699 PAK6Q9NQU5 681 aaPredicted RBP26.43■■□□□ 1.82
PBX1-201ENST00000340699 ZNF236Q9UL36 1845 aa26.42■■□□□ 1.82
PBX1-201ENST00000340699 TFRCP02786 760 aaKnown RBP26.42■■□□□ 1.82
PBX1-201ENST00000340699 CACNB2Q08289 660 aaPredicted RBP26.42■■□□□ 1.82
PBX1-201ENST00000340699 RASGRP2Q7LDG7 609 aa26.42■■□□□ 1.82
PBX1-201ENST00000340699 PPP4R2Q9NY27 417 aa26.42■■□□□ 1.82
PBX1-201ENST00000340699 RBM8AQ9Y5S9 174 aaKnown RBP26.42■■□□□ 1.82
PBX1-201ENST00000340699 COBLO75128 1261 aa26.41■■□□□ 1.82
PBX1-201ENST00000340699 PDHBP11177 359 aa26.41■■□□□ 1.82
PBX1-201ENST00000340699 MAP3K21Q5TCX8 1036 aa26.41■■□□□ 1.82
PBX1-201ENST00000340699 RALYLQ86SE5 291 aaKnown RBP26.41■■□□□ 1.82
PBX1-201ENST00000340699 ANKS1AQ92625 1134 aa26.41■■□□□ 1.82
PBX1-201ENST00000340699 GPCPD1Q9NPB8 672 aa26.41■■□□□ 1.82
PBX1-201ENST00000340699 FLRT1Q9NZU1 646 aa26.41■■□□□ 1.82
PBX1-201ENST00000340699 PRR12Q9ULL5 1215 aa26.41■■□□□ 1.82
PBX1-201ENST00000340699 RIPK3Q9Y572 518 aa26.41■■□□□ 1.82
PBX1-201ENST00000340699 TNKSO95271 1327 aa26.4■■□□□ 1.82
PBX1-201ENST00000340699 FRMPD2Q68DX3 1309 aaPredicted RBP26.4■■□□□ 1.82
PBX1-201ENST00000340699 CDC45O75419 566 aa26.4■■□□□ 1.82
PBX1-201ENST00000340699 PNMA1Q8ND90 353 aa26.4■■□□□ 1.82
PBX1-201ENST00000340699 NCOA7Q8NI08 942 aa26.4■■□□□ 1.82
PBX1-201ENST00000340699 ANO2Q9NQ90 1003 aa26.4■■□□□ 1.82
PBX1-201ENST00000340699 FBXO40Q9UH90 709 aa26.4■■□□□ 1.82
PBX1-201ENST00000340699 OLFML2BQ68BL8 750 aa26.39■■□□□ 1.82
PBX1-201ENST00000340699 TTBK2Q6IQ55 1244 aa26.39■■□□□ 1.82
PBX1-201ENST00000340699 BTNL9Q6UXG8 535 aa26.39■■□□□ 1.82
PBX1-201ENST00000340699 ENAHQ8N8S7 591 aaPredicted RBP26.39■■□□□ 1.82
PBX1-201ENST00000340699 CHST13Q8NET6 341 aa26.39■■□□□ 1.82
PBX1-201ENST00000340699 SHISA4Q96DD7 197 aa26.39■■□□□ 1.82
PBX1-201ENST00000340699 DDX11Q96FC9 970 aa26.39■■□□□ 1.82
PBX1-201ENST00000340699 LSG1Q9H089 658 aaKnown RBP26.39■■□□□ 1.82
PBX1-201ENST00000340699 ZNFX1Q9P2E3 1918 aaKnown RBP26.39■■□□□ 1.81
PBX1-201ENST00000340699 E7EWF7 191 aa26.38■■□□□ 1.81
PBX1-201ENST00000340699 SLC16A2P36021 539 aa26.38■■□□□ 1.81
PBX1-201ENST00000340699 ZNF543Q08ER8 600 aa26.38■■□□□ 1.81
PBX1-201ENST00000340699 IFIT1BQ5T764 474 aaKnown RBP26.38■■□□□ 1.81
PBX1-201ENST00000340699 SYDE2Q5VT97 1194 aa26.38■■□□□ 1.81
PBX1-201ENST00000340699 CCDC174Q6PII3 467 aa26.38■■□□□ 1.81
PBX1-201ENST00000340699 PGK2P07205 417 aa26.37■■□□□ 1.81
PBX1-201ENST00000340699 SNHG28P0DPA3 235 aa26.37■■□□□ 1.81
PBX1-201ENST00000340699 GPATCH4Q5T3I0 446 aaKnown RBP26.37■■□□□ 1.81
PBX1-201ENST00000340699 CYB5R4Q7L1T6 521 aa26.37■■□□□ 1.81
PBX1-201ENST00000340699 DIS3Q9Y2L1 958 aaKnown RBP26.37■■□□□ 1.81
PBX1-201ENST00000340699 ERICH2A1L162 156 aa26.36■■□□□ 1.81
PBX1-201ENST00000340699 CYP2C19P33261 490 aa26.36■■□□□ 1.81
PBX1-201ENST00000340699 SNAP25P60880 206 aa26.36■■□□□ 1.81
PBX1-201ENST00000340699 TKFCQ3LXA3 575 aa26.36■■□□□ 1.81
PBX1-201ENST00000340699 ANKRD35Q8N283 1001 aa26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms