RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NUP88Q99567 741 aaPredicted RBP12.69□□□□□ -0.38
CAPN3-202ENST00000337571 TINF2Q9BSI4 451 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 TEX13BQ9BXU2 312 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 NAPBQ9H115 298 aa12.69□□□□□ -0.38
CAPN3-202ENST00000337571 DIS3Q9Y2L1 958 aaKnown RBP12.69□□□□□ -0.38
CAPN3-202ENST00000337571 PRDM1O75626 825 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 TTLL1O95922 423 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 NDUFB10O96000 172 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 IGHA2P01877 340 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 PGK2P07205 417 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 RARBP10826 455 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 MDM2Q00987 491 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-202ENST00000337571 SNRNP48Q6IEG0 339 aaKnown RBP12.68□□□□□ -0.38
CAPN3-202ENST00000337571 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 PI4K2BQ8TCG2 481 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 MKL1Q969V6 931 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 NRBP1Q9UHY1 535 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 FEM1BQ9UK73 627 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 ZNF214Q9UL59 606 aaPredicted RBP12.68□□□□□ -0.38
CAPN3-202ENST00000337571 ISY1Q9ULR0 285 aaKnown RBP12.68□□□□□ -0.38
CAPN3-202ENST00000337571 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 MYH4Q9Y623 1939 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 ROBO3Q96MS0 1386 aa12.68□□□□□ -0.38
CAPN3-202ENST00000337571 RRP1P56182 461 aaKnown RBP12.67□□□□□ -0.38
CAPN3-202ENST00000337571 TFAP4Q01664 338 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 ZNF792Q3KQV3 632 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 SLC39A5Q6ZMH5 540 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 RNF180Q86T96 592 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 CEP95Q96GE4 821 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 SEC62Q99442 399 aaKnown RBP12.67□□□□□ -0.38
CAPN3-202ENST00000337571 EPB41L4AQ9HCS5 686 aaPredicted RBP12.67□□□□□ -0.38
CAPN3-202ENST00000337571 MTMR4Q9NYA4 1195 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 SYNPO2Q9UMS6 1093 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 ATP11BQ9Y2G3 1177 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 PLXNA1Q9UIW2 1896 aa12.67□□□□□ -0.38
CAPN3-202ENST00000337571 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-202ENST00000337571 FDX1P10109 184 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 ADCYAP1R1P41586 468 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 RTP1P59025 263 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 PPARAQ07869 468 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 IKQ13123 557 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-202ENST00000337571 LRIT3Q3SXY7 679 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 ZMYM1Q5SVZ6 1142 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 SLFN13Q68D06 897 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 GPR153Q6NV75 609 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 ANKRD35Q8N283 1001 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 NEDD1Q8NHV4 660 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 OTUD7AQ8TE49 926 aaPredicted RBP12.66□□□□□ -0.38
CAPN3-202ENST00000337571 FERMT2Q96AC1 680 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 EVI5LQ96CN4 794 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 XPNPEP3Q9NQH7 507 aa12.66□□□□□ -0.38
CAPN3-202ENST00000337571 GREB1LQ9C091 1923 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-202ENST00000337571 IGKV6D-41A0A0C4DH26 115 aa12.65□□□□□ -0.38
CAPN3-202ENST00000337571 ATP2A1O14983 1001 aa12.65□□□□□ -0.38
CAPN3-202ENST00000337571 BMP3P12645 472 aa12.65□□□□□ -0.38
CAPN3-202ENST00000337571 AKR1A1P14550 325 aa12.65□□□□□ -0.38
CAPN3-202ENST00000337571 LRRC41Q15345 812 aa12.65□□□□□ -0.38
CAPN3-202ENST00000337571 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
CAPN3-202ENST00000337571 MSL3Q8N5Y2 521 aaKnown RBP12.65□□□□□ -0.38
CAPN3-202ENST00000337571 GMCL1P1Q8NEA9 526 aa12.65□□□□□ -0.38
CAPN3-202ENST00000337571 REPS2Q8NFH8 660 aa12.65□□□□□ -0.38
CAPN3-202ENST00000337571 CHURC1Q8WUH1 139 aa12.65□□□□□ -0.38
CAPN3-202ENST00000337571 PRDM5Q9NQX1 630 aaPredicted RBP12.65□□□□□ -0.38
CAPN3-202ENST00000337571 FBXO40Q9UH90 709 aa12.65□□□□□ -0.38
CAPN3-202ENST00000337571 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
CAPN3-202ENST00000337571 TSPY2A6NKD2 308 aa12.64□□□□□ -0.39
CAPN3-202ENST00000337571 OAZ1P54368 228 aa12.64□□□□□ -0.39
CAPN3-202ENST00000337571 DEFB123Q8N688 67 aa12.64□□□□□ -0.39
CAPN3-202ENST00000337571 CRBNQ96SW2 442 aa12.64□□□□□ -0.39
CAPN3-202ENST00000337571 SLC38A10Q9HBR0 1119 aa12.64□□□□□ -0.39
CAPN3-202ENST00000337571 RAVER2Q9HCJ3 691 aaKnown RBP12.64□□□□□ -0.39
CAPN3-202ENST00000337571 FAM184BQ9ULE4 1060 aa12.64□□□□□ -0.39
CAPN3-202ENST00000337571 STX8Q9UNK0 236 aa12.64□□□□□ -0.39
CAPN3-202ENST00000337571 RIPK3Q9Y572 518 aa12.64□□□□□ -0.39
CAPN3-202ENST00000337571 SMCHD1A6NHR9 2005 aa12.64□□□□□ -0.39
CAPN3-202ENST00000337571 TMEM232C9JQI7 657 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 RANBP6O60518 1105 aaKnown RBP12.63□□□□□ -0.39
CAPN3-202ENST00000337571 PGK1P00558 417 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 SLC1A4P43007 532 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 STAT2P52630 851 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 AAMPQ13685 434 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-202ENST00000337571 FAM160B2Q86V87 743 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 CHST13Q8NET6 341 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 HELLSQ9NRZ9 838 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 TOMM22Q9NS69 142 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 LAMA3Q16787 3333 aa12.63□□□□□ -0.39
CAPN3-202ENST00000337571 SYNGAP1Q96PV0 1343 aa12.62□□□□□ -0.39
CAPN3-202ENST00000337571 TRIM6-TRIM34B2RNG4 842 aa12.62□□□□□ -0.39
CAPN3-202ENST00000337571 ZNF865P0CJ78 1059 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-202ENST00000337571 TAL1P17542 331 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-202ENST00000337571 MCCP23508 829 aa12.62□□□□□ -0.39
CAPN3-202ENST00000337571 PDE1AP54750 535 aa12.62□□□□□ -0.39
CAPN3-202ENST00000337571 CTDSPL2Q05D32 466 aa12.62□□□□□ -0.39
CAPN3-202ENST00000337571 HDAC1Q13547 482 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms