RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 FLT1P17948 1338 aa10.23□□□□□ -0.77
TREM1-202ENST00000334475 ZC3H4Q9UPT8 1303 aaKnown RBP10.23□□□□□ -0.77
TREM1-202ENST00000334475 ADAMTSL1Q8N6G6 1762 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 C6orf229H3BNL8 230 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 hCG_1984214I3L0E3 225 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
TREM1-202ENST00000334475 SRGNP10124 158 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 NOVP48745 357 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 VEGFBP49765 207 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 GSDMDP57764 484 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 RHBDL3P58872 404 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 NLRP5P59047 1200 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 FKBP1AP62942 108 aaKnown RBP10.22□□□□□ -0.77
TREM1-202ENST00000334475 ATP2C1P98194 919 aaPredicted RBP10.22□□□□□ -0.77
TREM1-202ENST00000334475 NOLC1Q14978 699 aaKnown RBP eCLIP10.22□□□□□ -0.77
TREM1-202ENST00000334475 DPCR1Q3MIW9 517 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 TTC38Q5R3I4 469 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 NT5DC1Q5TFE4 455 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 ZNF713Q8N859 430 aaPredicted RBP10.22□□□□□ -0.77
TREM1-202ENST00000334475 OXER1Q8TDS5 423 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 CCDC12Q8WUD4 166 aaPredicted RBP10.22□□□□□ -0.77
TREM1-202ENST00000334475 C7orf43Q8WVR3 580 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 ZNF622Q969S3 477 aaKnown RBP eCLIP10.22□□□□□ -0.77
TREM1-202ENST00000334475 MASTLQ96GX5 879 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 CLIC6Q96NY7 704 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 SPZ1Q9BXG8 430 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 TTC12Q9H892 705 aaPredicted RBP10.22□□□□□ -0.77
TREM1-202ENST00000334475 IL17RBQ9NRM6 502 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 CLIP2Q9UDT6 1046 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 JAG2Q9Y219 1238 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 CNTNAP1P78357 1384 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 COL4A5P29400 1685 aa10.22□□□□□ -0.77
TREM1-202ENST00000334475 PSME4Q14997 1843 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 PALM3A6NDB9 673 aaPredicted RBP10.21□□□□□ -0.77
TREM1-202ENST00000334475 H0YIN7 160 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 CBFA2T2O43439 604 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 TOP1P11387 765 aaKnown RBP10.21□□□□□ -0.77
TREM1-202ENST00000334475 CDK8P49336 464 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 MYL5Q02045 173 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 ORC2Q13416 577 aaPredicted RBP10.21□□□□□ -0.77
TREM1-202ENST00000334475 POSTNQ15063 836 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 NPY5RQ15761 445 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 GRIK5Q16478 980 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 ARL6IP4Q66PJ3 421 aaKnown RBP10.21□□□□□ -0.77
TREM1-202ENST00000334475 CCDC186Q7Z3E2 898 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 METTL16Q86W50 562 aaKnown RBP10.21□□□□□ -0.77
TREM1-202ENST00000334475 MAPKAPK5Q8IW41 473 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 MPNDQ8N594 471 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 MLKLQ8NB16 471 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 SPC24Q8NBT2 197 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 SHISA4Q96DD7 197 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 ZC3H12CQ9C0D7 883 aaKnown RBP10.21□□□□□ -0.77
TREM1-202ENST00000334475 KCNF1Q9H3M0 494 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 SWAP70Q9UH65 585 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 PCDHA4Q9UN74 947 aa10.21□□□□□ -0.77
TREM1-202ENST00000334475 ZNF541Q9H0D2 1346 aa10.21□□□□□ -0.78
TREM1-202ENST00000334475 LAD1O00515 517 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 NMT2O60551 498 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 SMC2O95347 1197 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 PTGS1P23219 599 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 SARSP49591 514 aaKnown RBP10.2□□□□□ -0.78
TREM1-202ENST00000334475 MDM2Q00987 491 aaPredicted RBP10.2□□□□□ -0.78
TREM1-202ENST00000334475 SEMA3FQ13275 785 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 NCAPHQ15003 741 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 LONRF3Q496Y0 759 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 HHIPL2Q6UWX4 724 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 BLIDQ8IZY5 108 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 CCDC150Q8NCX0 1101 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 SMARCE1Q969G3 411 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 DYNLL2Q96FJ2 89 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 PRIMPOLQ96LW4 560 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 GPR101Q96P66 508 aaPredicted RBP10.2□□□□□ -0.78
TREM1-202ENST00000334475 TMEM47Q9BQJ4 181 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 MRIQ9BWK5 157 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 OSBPL5Q9H0X9 879 aaPredicted RBP10.2□□□□□ -0.78
TREM1-202ENST00000334475 MAD2L2Q9UI95 211 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 DAGLAQ9Y4D2 1042 aa10.2□□□□□ -0.78
TREM1-202ENST00000334475 MYH4Q9Y623 1939 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 ACTN4O43707 911 aaKnown RBP10.19□□□□□ -0.78
TREM1-202ENST00000334475 NRDCO43847 1150 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 PARP1P09874 1014 aaKnown RBP10.19□□□□□ -0.78
TREM1-202ENST00000334475 PLCD1P51178 756 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 GTF2IP78347 998 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 HDLBPQ00341 1268 aaKnown RBP10.19□□□□□ -0.78
TREM1-202ENST00000334475 PNOCQ13519 176 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 STYK1Q6J9G0 422 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 DPP8Q6V1X1 898 aaPredicted RBP10.19□□□□□ -0.78
TREM1-202ENST00000334475 PODNQ7Z5L7 613 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 SPATA20Q8TB22 786 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 ZNF830Q96NB3 372 aaPredicted RBP10.19□□□□□ -0.78
TREM1-202ENST00000334475 CSRNP2Q9H175 543 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 TAF1DQ9H5J8 278 aaPredicted RBP10.19□□□□□ -0.78
TREM1-202ENST00000334475 SERTAD1Q9UHV2 236 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 PCDHA5Q9Y5H7 936 aa10.19□□□□□ -0.78
TREM1-202ENST00000334475 LTBP3Q9NS15 1303 aa10.18□□□□□ -0.78
TREM1-202ENST00000334475 ESYT2A0FGR8 921 aa10.18□□□□□ -0.78
TREM1-202ENST00000334475 USP17L3A6NCW0 530 aa10.18□□□□□ -0.78
TREM1-202ENST00000334475 USP17L4A6NCW7 530 aa10.18□□□□□ -0.78
TREM1-202ENST00000334475 M0R2N6 131 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms