RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 MAPK4P31152 587 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 TERF1P54274 439 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 ANKRD1Q15327 319 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 UVSSAQ2YD98 709 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 Q3C1V9 767 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 ZMYM1Q5SVZ6 1142 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 PRPF38BQ5VTL8 546 aaKnown RBP12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 RNF20Q5VTR2 975 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 LBX2Q6XYB7 198 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 SOCS4Q8WXH5 440 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 RABGAP1Q9Y3P9 1069 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 CYP46A1Q9Y6A2 500 aa12.93□□□□□ -0.34
APOBEC3B-201ENST00000333467 HMGCRP04035 888 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 APPP05067 770 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 ZSCAN22P10073 491 aaPredicted RBP12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 RASA1P20936 1047 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 ATP2B2Q01814 1243 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 GPR142Q7Z601 462 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 SIAH1Q8IUQ4 282 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 CCAR1Q8IX12 1150 aaKnown RBP12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 SPICE1Q8N0Z3 855 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 LPAR1Q92633 364 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 UPF3BQ9BZI7 483 aaKnown RBP12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 VCPKMTQ9H867 229 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 ZSWIM6Q9HCJ5 1215 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 TMEM63CQ9P1W3 806 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 GJD2Q9UKL4 321 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 TMX2Q9Y320 296 aa12.92□□□□□ -0.34
APOBEC3B-201ENST00000333467 CCDC171Q6TFL3 1326 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 GJB1P08034 283 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 EEF2P13639 858 aaKnown RBP12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 GJA8P48165 433 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 CWC27Q6UX04 472 aaKnown RBP12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 CCDC129Q6ZRS4 1044 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 IFNL3Q8IZI9 196 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 TRIB2Q92519 343 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 NUDT12Q9BQG2 462 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 TSPY26PQ9H489 355 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 BTBD7Q9P203 1132 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
APOBEC3B-201ENST00000333467 WDR46O15213 610 aaKnown RBP12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 FOXP2O15409 715 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 STX6O43752 255 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 CYP2B6P20813 491 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 PDCP20941 246 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 AK2P54819 239 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 UBE2HP62256 183 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 CCNA1P78396 465 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 TRIM32Q13049 653 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 NECTIN1Q15223 517 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 WDR78Q5VTH9 848 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 NKX2-3Q8TAU0 364 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 NACAP1Q9BZK3 213 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 NAPBQ9H115 298 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 RBSNQ9H1K0 784 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 KANSL2Q9H9L4 492 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 MKNK2Q9HBH9 465 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 PAK6Q9NQU5 681 aaPredicted RBP12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 CCDC39Q9UFE4 941 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 PLIN4Q96Q06 1357 aa12.9□□□□□ -0.34
APOBEC3B-201ENST00000333467 PATL2C9JE40 543 aaKnown RBP12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 PRDM1O75626 825 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 FLOT1O75955 427 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 TPM2P07951 284 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 KRT32Q14532 448 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 TSGA10IPQ3SY00 556 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 RUFY3Q7L099 469 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 PLEKHH3Q7Z736 793 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 DEFB118Q96PH6 123 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 APBA2Q99767 749 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 IL25Q9H293 177 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 PDRG1Q9NUG6 133 aa12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 NOL7Q9UMY1 257 aaKnown RBP12.89□□□□□ -0.35
APOBEC3B-201ENST00000333467 A0A0D9SFI3 127 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 RAD21O60216 631 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 F13A1P00488 732 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 CASTP20810 708 aaKnown RBP12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 RGS2P41220 211 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 COG2Q14746 738 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 MORN1Q5T089 497 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 CCDC183Q5T5S1 534 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 USP6NLQ92738 828 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 ATG4CQ96DT6 458 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 GOPCQ9HD26 462 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 SYCE3A1L190 88 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 ZNF500O60304 480 aaPredicted RBP12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 XRCC5P13010 732 aaKnown RBP12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 PPARAQ07869 468 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 CCL14Q16627 93 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 RASEFQ8IZ41 740 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 FAM227BQ96M60 508 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 SPATC1LQ9H0A9 340 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 ZNF287Q9HBT7 754 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 IVNS1ABPQ9Y6Y0 642 aa12.88□□□□□ -0.35
APOBEC3B-201ENST00000333467 DNAH12Q6ZR08 3092 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms