RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 CNBD1Q8NA66 436 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 SH3RF3Q8TEJ3 882 aaPredicted RBP12.15□□□□□ -0.46
CCDC172-201ENST00000333254 NGLY1Q96IV0 654 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 ZMYND12Q9H0C1 365 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 DISC1Q9NRI5 854 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 PODXL2Q9NZ53 605 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 NRXN2Q9P2S2 1712 aa12.15□□□□□ -0.46
CCDC172-201ENST00000333254 GAKO14976 1311 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 H7C1D1 291 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 STXBP3O00186 592 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 TADA3O75528 432 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 RPN1P04843 607 aaKnown RBP12.14□□□□□ -0.47
CCDC172-201ENST00000333254 TSPY3P0CV98 308 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 TSPY8P0CW00 308 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 MCM7P33993 719 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 RFC4P35249 363 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 TUBB4BP68371 445 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 MAP3K9P80192 1104 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 NAA30Q147X3 362 aaPredicted RBP12.14□□□□□ -0.47
CCDC172-201ENST00000333254 NFIXQ14938 502 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 FBXO38Q6PIJ6 1188 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 DTHD1Q6ZMT9 781 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 RASGRP2Q7LDG7 609 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 CREBRFQ8IUR6 639 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 ZNF444Q8N0Y2 327 aaPredicted RBP12.14□□□□□ -0.47
CCDC172-201ENST00000333254 NOC3LQ8WTT2 800 aaKnown RBP12.14□□□□□ -0.47
CCDC172-201ENST00000333254 TBC1D22AQ8WUA7 517 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 MTRQ99707 1265 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 ANKIB1Q9P2G1 1089 aa12.14□□□□□ -0.47
CCDC172-201ENST00000333254 ATP8B1O43520 1251 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 ZSCAN20P17040 1043 aaPredicted RBP12.13□□□□□ -0.47
CCDC172-201ENST00000333254 HMGB2P26583 209 aaKnown RBP12.13□□□□□ -0.47
CCDC172-201ENST00000333254 STAT6P42226 847 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 DMTNQ08495 405 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 COBLL1Q53SF7 1204 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 WWC2Q6AWC2 1192 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 TMTC1Q8IUR5 882 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 KIFC2Q96AC6 838 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 TMEM47Q9BQJ4 181 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 KBTBD4Q9NVX7 518 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 PCDHA6Q9UN73 950 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 PCDHA8Q9Y5H6 950 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 MYO3BQ8WXR4 1341 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 A0A1W2PQC6 194 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 FANCGO15287 622 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 TEX33O43247 280 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 CYTH3O43739 400 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 RHOBTB3O94955 611 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 EEF1GP26641 437 aaKnown RBP12.13□□□□□ -0.47
CCDC172-201ENST00000333254 HOXA10P31260 410 aaPredicted RBP12.13□□□□□ -0.47
CCDC172-201ENST00000333254 CASQ1P31415 396 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 COPB1P53618 953 aaKnown RBP12.13□□□□□ -0.47
CCDC172-201ENST00000333254 ADKP55263 362 aaKnown RBP12.13□□□□□ -0.47
CCDC172-201ENST00000333254 KCNQ4P56696 695 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 KRT31Q15323 416 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 SLC35G1Q2M3R5 365 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 NAALADL2Q58DX5 795 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 RRAGBQ5VZM2 374 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 PRR5LQ6MZQ0 368 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 TYW1BQ6NUM6 668 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 TOGARAM2Q6ZUX3 1019 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 PTF1AQ7RTS3 328 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 ADSSL1Q8N142 457 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 UBXN4Q92575 508 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 CD209Q9NNX6 404 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 ARGLU1Q9NWB6 273 aaPredicted RBP12.13□□□□□ -0.47
CCDC172-201ENST00000333254 MYO1AQ9UBC5 1043 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 TTF2Q9UNY4 1162 aaKnown RBP12.13□□□□□ -0.47
CCDC172-201ENST00000333254 CTNND2Q9UQB3 1225 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 SUGT1Q9Y2Z0 365 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 MRFAP1Q9Y605 127 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
CCDC172-201ENST00000333254 ANKRD31Q8N7Z5 1873 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 ONECUT3O60422 494 aaPredicted RBP12.12□□□□□ -0.47
CCDC172-201ENST00000333254 BBOX1O75936 387 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 GYPCP04921 128 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 VEGFAP15692 232 aaPredicted RBP12.12□□□□□ -0.47
CCDC172-201ENST00000333254 GNA11P29992 359 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 CBX1P83916 185 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 RBL2Q08999 1139 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 STIM1Q13586 685 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 ERCC6LQ2NKX8 1250 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 TCP11X2Q5H9J9 407 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 KLHL10Q6JEL2 608 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 KRT222Q8N1A0 295 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 MNS1Q8NEH6 495 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 DYNLL2Q96FJ2 89 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 C8orf37Q96NL8 207 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
CCDC172-201ENST00000333254 KLRG2A4D1S0 409 aaPredicted RBP12.11□□□□□ -0.47
CCDC172-201ENST00000333254 KLRC4O43908 158 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 BTDP43251 543 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 CDK8P49336 464 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 GNG11P61952 73 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 GOLGA8FQ08AF8 430 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 GOLGA8DPQ0D2H9 430 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms