RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 MAN1B1Q9UKM7 699 aa18.09■□□□□ 0.49
PGBD2-201ENST00000329291 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
PGBD2-201ENST00000329291 TTLL1O95922 423 aa18.08■□□□□ 0.49
PGBD2-201ENST00000329291 CASP1P29466 404 aa18.08■□□□□ 0.49
PGBD2-201ENST00000329291 INF2Q27J81 1249 aa18.08■□□□□ 0.49
PGBD2-201ENST00000329291 LARGE2Q8N3Y3 721 aa18.08■□□□□ 0.49
PGBD2-201ENST00000329291 PRMT6Q96LA8 375 aaPredicted RBP18.08■□□□□ 0.49
PGBD2-201ENST00000329291 IDI2Q9BXS1 227 aa18.08■□□□□ 0.49
PGBD2-201ENST00000329291 MTFR1LQ9H019 292 aa18.08■□□□□ 0.49
PGBD2-201ENST00000329291 ZMYND12Q9H0C1 365 aa18.08■□□□□ 0.49
PGBD2-201ENST00000329291 TDRD3Q9H7E2 651 aaKnown RBP18.08■□□□□ 0.49
PGBD2-201ENST00000329291 PYCARDQ9ULZ3 195 aa18.08■□□□□ 0.49
PGBD2-201ENST00000329291 SMARCA1P28370 1054 aa18.08■□□□□ 0.48
PGBD2-201ENST00000329291 NAPAP54920 295 aa18.08■□□□□ 0.48
PGBD2-201ENST00000329291 TTBK2Q6IQ55 1244 aa18.08■□□□□ 0.48
PGBD2-201ENST00000329291 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.08■□□□□ 0.48
PGBD2-201ENST00000329291 EHD4Q9H223 541 aa18.08■□□□□ 0.48
PGBD2-201ENST00000329291 VPS33BQ9H267 617 aa18.08■□□□□ 0.48
PGBD2-201ENST00000329291 PIM2Q9P1W9 311 aa18.08■□□□□ 0.48
PGBD2-201ENST00000329291 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
PGBD2-201ENST00000329291 SMCO2A6NFE2 343 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 CDC25BP30305 580 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 NT5DC1Q5TFE4 455 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 CCDC148Q8NFR7 591 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 MRFAP1L1Q96HT8 127 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 TMEM60Q9H2L4 133 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 MYO3BQ8WXR4 1341 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 CCDC194A0A1B0GVG4 234 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 CDC25AP30304 524 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 ATP2B2Q01814 1243 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 LRMPQ12912 555 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 GALNT17Q6IS24 598 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 PAGE5Q96GU1 130 aa18.07■□□□□ 0.48
PGBD2-201ENST00000329291 ZNF277Q9NRM2 450 aaPredicted RBP18.07■□□□□ 0.48
PGBD2-201ENST00000329291 OFD1O75665 1012 aa18.06■□□□□ 0.48
PGBD2-201ENST00000329291 SLFN14P0C7P3 912 aa18.06■□□□□ 0.48
PGBD2-201ENST00000329291 AFMP43652 599 aa18.06■□□□□ 0.48
PGBD2-201ENST00000329291 ZNF543Q08ER8 600 aa18.06■□□□□ 0.48
PGBD2-201ENST00000329291 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
PGBD2-201ENST00000329291 SH3RF1Q7Z6J0 888 aa18.06■□□□□ 0.48
PGBD2-201ENST00000329291 SPATA20Q8TB22 786 aa18.06■□□□□ 0.48
PGBD2-201ENST00000329291 COA7Q96BR5 231 aa18.06■□□□□ 0.48
PGBD2-201ENST00000329291 DHX36Q9H2U1 1008 aaKnown RBP18.06■□□□□ 0.48
PGBD2-201ENST00000329291 GOLGA6L6A8MZA4 724 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 ATP1A3P13637 1013 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 ARID5BQ14865 1188 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 ASPRV1Q53RT3 343 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 SIAH1Q8IUQ4 282 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 ZSCAN29Q8IWY8 852 aaPredicted RBP18.05■□□□□ 0.48
PGBD2-201ENST00000329291 PI4KBQ9UBF8 816 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 SEC63Q9UGP8 760 aaKnown RBP18.05■□□□□ 0.48
PGBD2-201ENST00000329291 IKBKBO14920 756 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 NPM3O75607 178 aaKnown RBP18.05■□□□□ 0.48
PGBD2-201ENST00000329291 LMOD1P29536 600 aaPredicted RBP18.05■□□□□ 0.48
PGBD2-201ENST00000329291 SLC16A2P36021 539 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 JAG1P78504 1218 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 MORC3Q14149 939 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 E2F4Q16254 413 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 RSBN1LQ6PCB5 846 aaPredicted RBP18.05■□□□□ 0.48
PGBD2-201ENST00000329291 STAMQ92783 540 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 SMARCE1Q969G3 411 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 JMJD4Q9H9V9 463 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 SIPA1L1O43166 1804 aa18.05■□□□□ 0.48
PGBD2-201ENST00000329291 PPP1R11O60927 126 aaPredicted RBP18.04■□□□□ 0.48
PGBD2-201ENST00000329291 RAD17O75943 681 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 DALRD3Q5D0E6 543 aaKnown RBP18.04■□□□□ 0.48
PGBD2-201ENST00000329291 KCTD1Q719H9 257 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 ADGRF4Q8IZF3 695 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 MED15Q96RN5 788 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 TMEM260Q9NX78 707 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 BIN2Q9UBW5 565 aaPredicted RBP18.04■□□□□ 0.48
PGBD2-201ENST00000329291 HOOK1Q9UJC3 728 aaKnown RBP18.04■□□□□ 0.48
PGBD2-201ENST00000329291 SMTNL1A8MU46 457 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 CERKLQ49MI3 558 aaPredicted RBP18.04■□□□□ 0.48
PGBD2-201ENST00000329291 KANK3Q6NY19 840 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 NIM1KQ8IY84 436 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 KIAA1524Q8TCG1 905 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 CACTINQ8WUQ7 758 aaKnown RBP18.04■□□□□ 0.48
PGBD2-201ENST00000329291 MTRQ99707 1265 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 IFNKQ9P0W0 207 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 HDAC9Q9UKV0 1011 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 COL4A5P29400 1685 aa18.04■□□□□ 0.48
PGBD2-201ENST00000329291 TPM3P06753 285 aa18.03■□□□□ 0.48
PGBD2-201ENST00000329291 EEF2P13639 858 aaKnown RBP18.03■□□□□ 0.48
PGBD2-201ENST00000329291 FMR1Q06787 632 aaKnown RBP eCLIP18.03■□□□□ 0.48
PGBD2-201ENST00000329291 RRP1BQ14684 758 aaKnown RBP18.03■□□□□ 0.48
PGBD2-201ENST00000329291 ARL6IP4Q66PJ3 421 aaKnown RBP18.03■□□□□ 0.48
PGBD2-201ENST00000329291 TATDN1Q6P1N9 297 aa18.03■□□□□ 0.48
PGBD2-201ENST00000329291 CCDC17Q96LX7 622 aa18.03■□□□□ 0.48
PGBD2-201ENST00000329291 XPO4Q9C0E2 1151 aaKnown RBP18.03■□□□□ 0.48
PGBD2-201ENST00000329291 C6orf50Q9HD87 102 aa18.03■□□□□ 0.48
PGBD2-201ENST00000329291 PP2D1A8MPX8 630 aa18.02■□□□□ 0.48
PGBD2-201ENST00000329291 PSMD14O00487 310 aa18.02■□□□□ 0.48
PGBD2-201ENST00000329291 VIL1P09327 827 aaKnown RBP18.02■□□□□ 0.48
PGBD2-201ENST00000329291 MYL5Q02045 173 aa18.02■□□□□ 0.48
PGBD2-201ENST00000329291 NOLC1Q14978 699 aaKnown RBP eCLIP18.02■□□□□ 0.48
PGBD2-201ENST00000329291 SEPT2Q15019 361 aa18.02■□□□□ 0.48
PGBD2-201ENST00000329291 JAKMIP3Q5VZ66 844 aa18.02■□□□□ 0.48
PGBD2-201ENST00000329291 TRIM34Q9BYJ4 488 aa18.02■□□□□ 0.48
PGBD2-201ENST00000329291 FANCLQ9NW38 375 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms