RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 USP17L24Q0WX57 530 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 AOC3Q16853 763 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 SPECC1LQ69YQ0 1117 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 USP17L6PQ6QN14 398 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 TAF4BQ92750 862 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 TMEM260Q9NX78 707 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 MAN1B1Q9UKM7 699 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 ZHX1Q9UKY1 873 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-201ENST00000321105 SEMA3EO15041 775 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 FAM13AO94988 1023 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 SLURP2P0DP57 97 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 TERF1P54274 439 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 CCDC122Q5T0U0 273 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 BICD1Q96G01 975 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 PXDNLA1KZ92 1463 aa12.33□□□□□ -0.44
TOP3A-201ENST00000321105 COL5A2P05997 1499 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-201ENST00000321105 NAA30Q147X3 362 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-201ENST00000321105 SF3B3Q15393 1217 aaKnown RBP12.32□□□□□ -0.44
TOP3A-201ENST00000321105 FAM114A1Q8IWE2 563 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 GJA10Q969M2 543 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 UBR1Q8IWV7 1749 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 BACH1O14867 736 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 BRIP1Q9BX63 1249 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 ZNF215Q9UL58 517 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-201ENST00000321105 ALAS1P13196 640 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 RBM6P78332 1123 aaKnown RBP12.32□□□□□ -0.44
TOP3A-201ENST00000321105 VPS72Q15906 364 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 ABCB5Q2M3G0 1257 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 NIM1KQ8IY84 436 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 FAM212AQ96EL1 285 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 TCHPQ9BT92 498 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 CLEC11AQ9Y240 323 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 PCDHB13Q9Y5F0 798 aa12.32□□□□□ -0.44
TOP3A-201ENST00000321105 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-201ENST00000321105 CCDC84Q86UT8 332 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-201ENST00000321105 IFT172Q9UG01 1749 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 PRPF3O43395 683 aaKnown RBP12.31□□□□□ -0.44
TOP3A-201ENST00000321105 PPP6R2O75170 966 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.44
TOP3A-201ENST00000321105 TTBK2Q6IQ55 1244 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 SLC51AQ86UW1 340 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 KIAA1524Q8TCG1 905 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-201ENST00000321105 POTEMA6NI47 508 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 ZNF500O60304 480 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-201ENST00000321105 GH2P01242 217 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 RPN1P04843 607 aaKnown RBP12.31□□□□□ -0.44
TOP3A-201ENST00000321105 HLTFQ14527 1009 aaKnown RBP eCLIP12.31□□□□□ -0.44
TOP3A-201ENST00000321105 ERCC6LQ2NKX8 1250 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 LRP10Q7Z4F1 713 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 ARHGEF10LQ9HCE6 1279 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 PCDHA4Q9UN74 947 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 KIAA1024Q9UPX6 916 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 ERLIN1O75477 346 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 KIF20AO95235 890 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 AKR1B1P15121 316 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 KIF5AQ12840 1032 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 MORC3Q14149 939 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 SEPT2Q15019 361 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 RGS22Q8NE09 1264 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 TBC1D16Q8TBP0 767 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
TOP3A-201ENST00000321105 ZNF277Q9NRM2 450 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-201ENST00000321105 TRIM49BA6NDI0 452 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 CASP14P31944 242 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 CYLC1P35663 651 aaPredicted RBP12.3□□□□□ -0.44
TOP3A-201ENST00000321105 CUL4BQ13620 913 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 SGMS1Q86VZ5 419 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 HPS3Q969F9 1004 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 CAMTA1Q9Y6Y1 1673 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 KCNJ18B7U540 433 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 TTLL1O95922 423 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 PTPREP23469 700 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 KCNJ12Q14500 433 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 NEK11Q8NG66 645 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 DDX25Q9UHL0 483 aaKnown RBP12.3□□□□□ -0.44
TOP3A-201ENST00000321105 SLFN14P0C7P3 912 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 HMGB2P26583 209 aaKnown RBP12.3□□□□□ -0.44
TOP3A-201ENST00000321105 PAFAH1B1P43034 410 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 EVCP57679 992 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 TYW1BQ6NUM6 668 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 CNGA4Q8IV77 575 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 MRFAP1L1Q96HT8 127 aa12.3□□□□□ -0.44
TOP3A-201ENST00000321105 SRPRBQ9Y5M8 271 aaKnown RBP12.3□□□□□ -0.44
TOP3A-201ENST00000321105 BICDL2A1A5D9 508 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 CCDC169A6NNP5 214 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 USP27XA6NNY8 438 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 KANSL2Q9H9L4 492 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 GINS2Q9Y248 185 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 ABCC12Q96J65 1359 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 CTAGE9A4FU28 777 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 GCNT3O95395 438 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 PLCG1P19174 1290 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 BAG6P46379 1132 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 ALX1Q15699 326 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 PAXIP1Q6ZW49 1069 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-201ENST00000321105 GPBP1Q86WP2 473 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 CCDC65Q8IXS2 484 aa12.29□□□□□ -0.44
TOP3A-201ENST00000321105 CNKSR1Q969H4 720 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms