RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 SPOPO43791 374 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 COPB1P53618 953 aaKnown RBP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 USP49Q70CQ1 688 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 NEK8Q86SG6 692 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 TRIM49BA6NDI0 452 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 TUBB4AP04350 444 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 VPS41P49754 854 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 MYO1AQ9UBC5 1043 aa18.32■□□□□ 0.52
CLIP4-201ENST00000320081 DDX41Q9UJV9 622 aaKnown RBP18.32■□□□□ 0.52
CLIP4-201ENST00000320081 A0A1W2PRG0 241 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 PRR29P0C7W0 189 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 FBXO38Q6PIJ6 1188 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 CEP57Q86XR8 500 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 DNM3Q9UQ16 869 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
CLIP4-201ENST00000320081 GDF11O95390 407 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 NBPF11Q86T75 865 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 LARGE2Q8N3Y3 721 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 TUBGCP2Q9BSJ2 902 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 KCNK9Q9NPC2 374 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 UNC13BO14795 1591 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 MED14O60244 1454 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 EPB41P11171 864 aaKnown RBP18.31■□□□□ 0.52
CLIP4-201ENST00000320081 UBE2SQ16763 222 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 CPLX4Q7Z7G2 160 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 LSM14BQ9BX40 385 aaKnown RBP18.31■□□□□ 0.52
CLIP4-201ENST00000320081 PDE11AQ9HCR9 933 aa18.31■□□□□ 0.52
CLIP4-201ENST00000320081 NPHP4O75161 1426 aaPredicted RBP18.3■□□□□ 0.52
CLIP4-201ENST00000320081 DAAM2Q86T65 1068 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 TBCKQ8TEA7 893 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 RNF26Q9BY78 433 aaPredicted RBP18.3■□□□□ 0.52
CLIP4-201ENST00000320081 KIAA1024Q9UPX6 916 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 FRMD4BQ9Y2L6 1034 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 PCDHA1Q9Y5I3 950 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 NDUFAB1O14561 156 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 KCTD16Q68DU8 428 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 KAZALD1Q96I82 304 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 KANSL2Q9H9L4 492 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.3■□□□□ 0.52
CLIP4-201ENST00000320081 ARHGEF35A5YM69 484 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 GCOM1H8Y6P7 765 aaPredicted RBP18.3■□□□□ 0.52
CLIP4-201ENST00000320081 MYZAPP0CAP1 466 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 RPL13P26373 211 aaKnown RBP18.3■□□□□ 0.52
CLIP4-201ENST00000320081 FMR1NBQ8N0W7 255 aaPredicted RBP18.3■□□□□ 0.52
CLIP4-201ENST00000320081 DPF2Q92785 391 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 NOX5Q96PH1 765 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 ARHGEF40Q8TER5 1519 aa18.3■□□□□ 0.52
CLIP4-201ENST00000320081 GOLGA6CA6NDK9 693 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 GOLGA6DP0CG33 693 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 TNFAIP3P21580 790 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 ASIC2Q16515 512 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 TMEM87AQ8NBN3 555 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 JDP2Q8WYK2 163 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 GOLGA6AQ9NYA3 693 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 SHROOM2Q13796 1616 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 DMTNQ08495 405 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 PPP2R5BQ15173 497 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 FOXP1Q9H334 677 aaPredicted RBP18.29■□□□□ 0.52
CLIP4-201ENST00000320081 ZCCHC17Q9NP64 241 aaKnown RBP18.29■□□□□ 0.52
CLIP4-201ENST00000320081 GOLGA6BA6NDN3 693 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 OPA1O60313 960 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 NEBLO76041 1014 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 CCDC127Q96BQ5 260 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 QRICH2Q9H0J4 1663 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 TEX33O43247 280 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 GTPBP6O43824 516 aaPredicted RBP18.29■□□□□ 0.52
CLIP4-201ENST00000320081 TRIM37O94972 964 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 SLFN14P0C7P3 912 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 NKX1-1Q15270 411 aaPredicted RBP18.29■□□□□ 0.52
CLIP4-201ENST00000320081 PPP1R7Q15435 360 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 CNOT6LQ96LI5 555 aaKnown RBP18.29■□□□□ 0.52
CLIP4-201ENST00000320081 CTTNBP2NLQ9P2B4 639 aa18.29■□□□□ 0.52
CLIP4-201ENST00000320081 PPP6R2O75170 966 aa18.28■□□□□ 0.52
CLIP4-201ENST00000320081 RASSF7Q02833 373 aa18.28■□□□□ 0.52
CLIP4-201ENST00000320081 OTUD6BQ8N6M0 293 aa18.28■□□□□ 0.52
CLIP4-201ENST00000320081 KCNF1Q9H3M0 494 aa18.28■□□□□ 0.52
CLIP4-201ENST00000320081 ARAP3Q8WWN8 1544 aa18.28■□□□□ 0.52
CLIP4-201ENST00000320081 MB21D2Q8IYB1 491 aaPredicted RBP18.28■□□□□ 0.52
CLIP4-201ENST00000320081 USTQ9Y2C2 406 aa18.28■□□□□ 0.52
CLIP4-201ENST00000320081 ZNF609O15014 1411 aa18.28■□□□□ 0.52
CLIP4-201ENST00000320081 EHHADHQ08426 723 aa18.28■□□□□ 0.52
CLIP4-201ENST00000320081 MTF1Q14872 753 aa18.28■□□□□ 0.52
CLIP4-201ENST00000320081 TAB3Q8N5C8 712 aaPredicted RBP18.28■□□□□ 0.52
CLIP4-201ENST00000320081 U2AF1L4Q8WU68 220 aaKnown RBP18.28■□□□□ 0.52
CLIP4-201ENST00000320081 ARHGAP31Q2M1Z3 1444 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 KCNK3O14649 394 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 STX10O60499 249 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 APBA3O96018 575 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 CCDC172P0C7W6 258 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 CUL4BQ13620 913 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 MYOCDQ8IZQ8 938 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 AFAP1L1Q8TED9 768 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 PSMD1Q99460 953 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 TNNC1P63316 161 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 NCBP1Q09161 790 aaKnown RBP18.27■□□□□ 0.52
CLIP4-201ENST00000320081 HAUS3Q68CZ6 603 aa18.27■□□□□ 0.52
CLIP4-201ENST00000320081 SPATA31A3Q5VYP0 1347 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms