RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 NCAPHQ15003 741 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 CCDC93Q567U6 631 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 ZSCAN29Q8IWY8 852 aaPredicted RBP20.93■□□□□ 0.94
CCDC43-201ENST00000315286 CCDC17Q96LX7 622 aa20.93■□□□□ 0.94
CCDC43-201ENST00000315286 SMCO2A6NFE2 343 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 NPM3O75607 178 aaKnown RBP20.92■□□□□ 0.94
CCDC43-201ENST00000315286 INF2Q27J81 1249 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 CFAP100Q494V2 611 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 KANK3Q6NY19 840 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 CCDC12Q8WUD4 166 aaPredicted RBP20.92■□□□□ 0.94
CCDC43-201ENST00000315286 PRMT6Q96LA8 375 aaPredicted RBP20.92■□□□□ 0.94
CCDC43-201ENST00000315286 KCNF1Q9H3M0 494 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 GPCPD1Q9NPB8 672 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 NRBP1Q9UHY1 535 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 TPM3P06753 285 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 BMP6P22004 513 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 CDC25BP30305 580 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 ATP2B2Q01814 1243 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 RTKN2Q8IZC4 609 aa20.92■□□□□ 0.94
CCDC43-201ENST00000315286 PTGS1P23219 599 aa20.91■□□□□ 0.94
CCDC43-201ENST00000315286 SARSP49591 514 aaKnown RBP20.91■□□□□ 0.94
CCDC43-201ENST00000315286 ZNF543Q08ER8 600 aa20.91■□□□□ 0.94
CCDC43-201ENST00000315286 SHROOM1Q2M3G4 852 aaPredicted RBP20.91■□□□□ 0.94
CCDC43-201ENST00000315286 GRIPAP1Q4V328 841 aa20.91■□□□□ 0.94
CCDC43-201ENST00000315286 NT5DC1Q5TFE4 455 aa20.91■□□□□ 0.94
CCDC43-201ENST00000315286 MRFAP1L1Q96HT8 127 aa20.91■□□□□ 0.94
CCDC43-201ENST00000315286 C6orf50Q9HD87 102 aa20.91■□□□□ 0.94
CCDC43-201ENST00000315286 MAN1B1Q9UKM7 699 aa20.91■□□□□ 0.94
CCDC43-201ENST00000315286 SMTNL1A8MU46 457 aa20.9■□□□□ 0.94
CCDC43-201ENST00000315286 ARL6IP4Q66PJ3 421 aaKnown RBP20.9■□□□□ 0.94
CCDC43-201ENST00000315286 CCDC186Q7Z3E2 898 aa20.9■□□□□ 0.94
CCDC43-201ENST00000315286 PSME4Q14997 1843 aa20.9■□□□□ 0.94
CCDC43-201ENST00000315286 SLFN14P0C7P3 912 aa20.9■□□□□ 0.94
CCDC43-201ENST00000315286 GNA11P29992 359 aa20.9■□□□□ 0.94
CCDC43-201ENST00000315286 CERKLQ49MI3 558 aaPredicted RBP20.9■□□□□ 0.94
CCDC43-201ENST00000315286 SOGA3Q5TF21 947 aa20.9■□□□□ 0.94
CCDC43-201ENST00000315286 SLC16A10Q8TF71 515 aa20.9■□□□□ 0.94
CCDC43-201ENST00000315286 SMARCE1Q969G3 411 aa20.9■□□□□ 0.94
CCDC43-201ENST00000315286 PSMD1Q99460 953 aa20.9■□□□□ 0.94
CCDC43-201ENST00000315286 IKBKBO14920 756 aa20.89■□□□□ 0.93
CCDC43-201ENST00000315286 TTBK2Q6IQ55 1244 aa20.89■□□□□ 0.93
CCDC43-201ENST00000315286 ZNF277Q9NRM2 450 aaPredicted RBP20.89■□□□□ 0.93
CCDC43-201ENST00000315286 RAD17O75943 681 aa20.89■□□□□ 0.93
CCDC43-201ENST00000315286 TATDN1Q6P1N9 297 aa20.89■□□□□ 0.93
CCDC43-201ENST00000315286 SH3RF1Q7Z6J0 888 aa20.89■□□□□ 0.93
CCDC43-201ENST00000315286 SPATA20Q8TB22 786 aa20.89■□□□□ 0.93
CCDC43-201ENST00000315286 TMEM60Q9H2L4 133 aa20.89■□□□□ 0.93
CCDC43-201ENST00000315286 AFMP43652 599 aa20.88■□□□□ 0.93
CCDC43-201ENST00000315286 RSBN1LQ6PCB5 846 aaPredicted RBP20.88■□□□□ 0.93
CCDC43-201ENST00000315286 KRT25Q7Z3Z0 450 aa20.88■□□□□ 0.93
CCDC43-201ENST00000315286 ADGRF4Q8IZF3 695 aa20.88■□□□□ 0.93
CCDC43-201ENST00000315286 LARGE2Q8N3Y3 721 aa20.88■□□□□ 0.93
CCDC43-201ENST00000315286 COA7Q96BR5 231 aa20.88■□□□□ 0.93
CCDC43-201ENST00000315286 PAGE5Q96GU1 130 aa20.88■□□□□ 0.93
CCDC43-201ENST00000315286 TRIM34Q9BYJ4 488 aa20.88■□□□□ 0.93
CCDC43-201ENST00000315286 HSD3B7Q9H2F3 369 aa20.88■□□□□ 0.93
CCDC43-201ENST00000315286 JMJD4Q9H9V9 463 aa20.88■□□□□ 0.93
CCDC43-201ENST00000315286 MORC3Q14149 939 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 CCDC144BQ3MJ40 725 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 ESYT2A0FGR8 921 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 PSMD14O00487 310 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 ENTPD3O75355 529 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 EEF2P13639 858 aaKnown RBP20.87■□□□□ 0.93
CCDC43-201ENST00000315286 LONP1P36776 959 aaKnown RBP20.87■□□□□ 0.93
CCDC43-201ENST00000315286 TPM4P67936 248 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 PPP4R3BQ5MIZ7 849 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 KCTD1Q719H9 257 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 CCDC34Q96HJ3 373 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 BIN2Q9UBW5 565 aaPredicted RBP20.87■□□□□ 0.93
CCDC43-201ENST00000315286 COL4A5P29400 1685 aa20.87■□□□□ 0.93
CCDC43-201ENST00000315286 hCG_1984214I3L0E3 225 aa20.86■□□□□ 0.93
CCDC43-201ENST00000315286 LMOD1P29536 600 aaPredicted RBP20.86■□□□□ 0.93
CCDC43-201ENST00000315286 SLC16A2P36021 539 aa20.86■□□□□ 0.93
CCDC43-201ENST00000315286 MYL5Q02045 173 aa20.86■□□□□ 0.93
CCDC43-201ENST00000315286 NONOQ15233 471 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCDC43-201ENST00000315286 E2F4Q16254 413 aa20.86■□□□□ 0.93
CCDC43-201ENST00000315286 CCDC96Q2M329 555 aa20.86■□□□□ 0.93
CCDC43-201ENST00000315286 GPATCH4Q5T3I0 446 aaKnown RBP20.86■□□□□ 0.93
CCDC43-201ENST00000315286 ZNF713Q8N859 430 aaPredicted RBP20.86■□□□□ 0.93
CCDC43-201ENST00000315286 MKL1Q969V6 931 aa20.86■□□□□ 0.93
CCDC43-201ENST00000315286 KANSL2Q9H9L4 492 aa20.86■□□□□ 0.93
CCDC43-201ENST00000315286 OFD1O75665 1012 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 VIL1P09327 827 aaKnown RBP20.85■□□□□ 0.93
CCDC43-201ENST00000315286 CASP1P29466 404 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 CDC25AP30304 524 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 SEPT2Q15019 361 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 DTHD1Q6ZMT9 781 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 SIAH1Q8IUQ4 282 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 TRIML1Q8N9V2 468 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 NYAP2Q9P242 653 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 PYCARDQ9ULZ3 195 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 ATRNL1Q5VV63 1379 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 PNMA6FA0A0J9YX94 578 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 JAKMIP3Q5VZ66 844 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 REXO1Q8N1G1 1221 aaKnown RBP20.85■□□□□ 0.93
CCDC43-201ENST00000315286 C17orf53Q8N3J3 647 aaPredicted RBP20.85■□□□□ 0.93
CCDC43-201ENST00000315286 IQUBQ8NA54 791 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 GMLQ99445 158 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 TMEM260Q9NX78 707 aa20.85■□□□□ 0.93
CCDC43-201ENST00000315286 PPP1R11O60927 126 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms