RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 USP32Q8NFA0 1604 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 FAM170AA1A519 330 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 MYCLP12524 364 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 TRAPPC10P48553 1259 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 LRRC41Q15345 812 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 ERO1AQ96HE7 468 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 CAPZA3Q96KX2 299 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 CCDC17Q96LX7 622 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 FAM207AQ9NSI2 230 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 PRR29P0C7W0 189 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 DCAF17Q5H9S7 520 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 RC3H1Q5TC82 1133 aaKnown RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 TMTC1Q8IUR5 882 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 RDH13Q8NBN7 331 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 KIAA1210Q9ULL0 1709 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 SPATA31A5Q5VU36 1347 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 SPATA31A7Q8IWB4 1347 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 SNAP25P60880 206 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 ZNF512BQ96KM6 892 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 STK36Q9NRP7 1315 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 GDF11O95390 407 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 C3orf67Q6ZVT6 689 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 BCL2L12Q9HB09 334 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 PPP2R2CQ9Y2T4 447 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 TACC1O75410 805 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 PRR16Q569H4 304 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 COA1Q9GZY4 146 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 DNM3Q9UQ16 869 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 C21orf2O43822 256 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 KRT13P13646 458 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 MAGEA1P43355 309 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 CETN1Q12798 172 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 PAGE5Q96GU1 130 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 GTPBP4Q9BZE4 634 aaKnown RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 KDM4FA0A1W2PPD8 638 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 ERCC5P28715 1186 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 EHBP1Q8NDI1 1231 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 WTIPA6NIX2 430 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-201ENST00000314191 HLTFQ14527 1009 aaKnown RBP eCLIP6.92□□□□□ -1.31e-6■□□□□ 10.8
PRKDC-201ENST00000314191 RESP18Q5W5W9 173 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 CYP26C1Q6V0L0 522 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 HPS5Q9UPZ3 1129 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 PCDHA1Q9Y5I3 950 aa6.92□□□□□ -1.3
PRKDC-201ENST00000314191 PP2D1A8MPX8 630 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 MORC3Q14149 939 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 ABCB5Q2M3G0 1257 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 USP49Q70CQ1 688 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 BICD1Q96G01 975 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 PPP4R3AQ6IN85 833 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 BARGINQ6ZT62 677 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 GPBP1Q86WP2 473 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 ARFGAP3Q9NP61 516 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 MROH7-TTC4A0A0A0MT08 1334 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 CETN3O15182 167 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 RBL2Q08999 1139 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 ELF2Q15723 593 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 WDR19Q8NEZ3 1342 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 RXRBP28702 533 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 CEP112Q8N8E3 955 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 ENOX1Q8TC92 643 aaKnown RBP6.91□□□□□ -1.3
PRKDC-201ENST00000314191 DPF2Q92785 391 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 MYO6Q9UM54 1294 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 C12orf60Q5U649 245 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.91□□□□□ -1.3
PRKDC-201ENST00000314191 CSRNP1Q96S65 589 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 ETF1P62495 437 aaKnown RBP6.91□□□□□ -1.3
PRKDC-201ENST00000314191 HAUS3Q68CZ6 603 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 CEP95Q96GE4 821 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 HOMER2Q9NSB8 354 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 USP17L5A8MUK1 530 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 NIM1KQ8IY84 436 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 SRBD1Q8N5C6 995 aaKnown RBP6.91□□□□□ -1.3
PRKDC-201ENST00000314191 CCDC66A2RUB6 948 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 POTEB2H3BUK9 544 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 GLT8D2Q9H1C3 349 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 TTLL1O95922 423 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 MYCT1Q8N699 235 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 ZFP91Q96JP5 570 aaPredicted RBP6.91□□□□□ -1.3
PRKDC-201ENST00000314191 ERLIN2O94905 339 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 CYP4A11Q02928 519 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 CUL4BQ13620 913 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 MCM6Q14566 821 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 PFKFB3Q16875 520 aaPredicted RBP6.91□□□□□ -1.3
PRKDC-201ENST00000314191 FAM26FQ5R3K3 315 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 FBXO33Q7Z6M2 555 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 MASTLQ96GX5 879 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 DDX25Q9UHL0 483 aaKnown RBP6.91□□□□□ -1.3
PRKDC-201ENST00000314191 GDAQ9Y2T3 454 aa6.91□□□□□ -1.3
PRKDC-201ENST00000314191 TERF1P54274 439 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 PPP2R3AQ06190 1150 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 GALNT17Q6IS24 598 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 GOLGA1Q92805 767 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 ARHGEF35A5YM69 484 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 COPB1P53618 953 aaKnown RBP6.9□□□□□ -1.3
PRKDC-201ENST00000314191 TCHPQ9BT92 498 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 TMEM260Q9NX78 707 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 RAD17O75943 681 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 MYOCDQ8IZQ8 938 aa6.9□□□□□ -1.3
PRKDC-201ENST00000314191 ANKRD13CQ8N6S4 541 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms