RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 GAS2L3Q86XJ1 694 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 TBC1D7Q9P0N9 293 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 DKC1O60832 514 aaKnown RBP eCLIP15.31■□□□□ 0.04
DDX54-202ENST00000314045 IGSF3O75054 1194 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 CCDC172P0C7W6 258 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 R3HDM1Q15032 1099 aaKnown RBP15.31■□□□□ 0.04
DDX54-202ENST00000314045 ZNF827Q17R98 1081 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 NLRX1Q86UT6 975 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 NEK11Q8NG66 645 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 TBCKQ8TEA7 893 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 PCDHA5Q9Y5H7 936 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 KNDC1Q76NI1 1749 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 CETN3O15182 167 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 ASNSP08243 561 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 LONP1P36776 959 aaKnown RBP15.31■□□□□ 0.04
DDX54-202ENST00000314045 TBC1D10BQ4KMP7 808 aaPredicted RBP15.31■□□□□ 0.04
DDX54-202ENST00000314045 MCF2L2Q86YR7 1114 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 NOC4LQ9BVI4 516 aaKnown RBP15.31■□□□□ 0.04
DDX54-202ENST00000314045 FMN2Q9NZ56 1722 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 TESPA1A2RU30 521 aaPredicted RBP15.31■□□□□ 0.04
DDX54-202ENST00000314045 PAFAH1B1P43034 410 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 ZNF75DP51815 510 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 STRIP1Q5VSL9 837 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 PUF60Q9UHX1 559 aaKnown RBP15.31■□□□□ 0.04
DDX54-202ENST00000314045 PNMA2Q9UL42 364 aa15.31■□□□□ 0.04
DDX54-202ENST00000314045 SEPT2Q15019 361 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 TBC1D5Q92609 795 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 PGBD1Q96JS3 809 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 NRXN3Q9Y4C0 1643 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
DDX54-202ENST00000314045 GADL1Q6ZQY3 521 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 PLA2G4DQ86XP0 818 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 NEDD1Q8NHV4 660 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 CCDC42Q96M95 316 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 PCDHB6Q9Y5E3 794 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 CETN2P41208 172 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 STAT2P52630 851 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 RCAN1P53805 252 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 KARSQ15046 597 aaKnown RBP15.3■□□□□ 0.04
DDX54-202ENST00000314045 DCAF17Q5H9S7 520 aaPredicted RBP15.3■□□□□ 0.04
DDX54-202ENST00000314045 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.3■□□□□ 0.04
DDX54-202ENST00000314045 NWD1Q149M9 1564 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 SHPRHQ149N8 1683 aa15.3■□□□□ 0.04
DDX54-202ENST00000314045 USP17L5A8MUK1 530 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 hCG_1984214I3L0E3 225 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 NOP56O00567 594 aaKnown RBP15.29■□□□□ 0.04
DDX54-202ENST00000314045 DESP17661 470 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 FGFR2P21802 821 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 SMTNP53814 917 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 SYDE2Q5VT97 1194 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 ZNF713Q8N859 430 aaPredicted RBP15.29■□□□□ 0.04
DDX54-202ENST00000314045 IGSF22Q8N9C0 903 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 ALS2CR12Q96Q35 445 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 ERLIN2O94905 339 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 ARHGEF16Q5VV41 709 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 EPB41L4AQ9HCS5 686 aaPredicted RBP15.29■□□□□ 0.04
DDX54-202ENST00000314045 C3orf67Q6ZVT6 689 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 PTF1AQ7RTS3 328 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.29■□□□□ 0.04
DDX54-202ENST00000314045 NELFCDQ8IXH7 590 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 SLFN12Q8IYM2 578 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 ANKRD35Q8N283 1001 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 VTI1AQ96AJ9 217 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 DNAI2Q9GZS0 605 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 KDM3AQ9Y4C1 1321 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 CDR1P51861 262 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 CNGA4Q8IV77 575 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 MYCT1Q8N699 235 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 SLC16A10Q8TF71 515 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 PRM3Q9NNZ6 103 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 DNAI1Q9UI46 699 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 ZDHHC9Q9Y397 364 aa15.29■□□□□ 0.04
DDX54-202ENST00000314045 MON2Q7Z3U7 1717 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 CCDC175P0C221 793 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 PNMA6FA0A0J9YX94 578 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 TMCO5BA8MYB1 307 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 CDC25AP30304 524 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 USP14P54578 494 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 MIER3Q7Z3K6 550 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 ZNRF3Q9ULT6 936 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 GTPBP6O43824 516 aaPredicted RBP15.28■□□□□ 0.04
DDX54-202ENST00000314045 GNPTABQ3T906 1256 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 MXD3Q9BW11 206 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 TAB2Q9NYJ8 693 aa15.28■□□□□ 0.04
DDX54-202ENST00000314045 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.28■□□□□ 0.04
DDX54-202ENST00000314045 AKR1B15C9JRZ8 316 aaPredicted RBP15.27■□□□□ 0.04
DDX54-202ENST00000314045 LAD1O00515 517 aa15.27■□□□□ 0.04
DDX54-202ENST00000314045 EPB41P11171 864 aaKnown RBP15.27■□□□□ 0.04
DDX54-202ENST00000314045 CDC37Q16543 378 aaPredicted RBP15.27■□□□□ 0.04
DDX54-202ENST00000314045 TXNRD3Q86VQ6 643 aa15.27■□□□□ 0.04
DDX54-202ENST00000314045 GPBP1Q86WP2 473 aa15.27■□□□□ 0.04
DDX54-202ENST00000314045 NFAT5O94916 1531 aa15.27■□□□□ 0.04
DDX54-202ENST00000314045 ERCC3P19447 782 aa15.27■□□□□ 0.04
DDX54-202ENST00000314045 UBXN2AP68543 259 aa15.27■□□□□ 0.04
DDX54-202ENST00000314045 CYP4A11Q02928 519 aa15.27■□□□□ 0.04
DDX54-202ENST00000314045 SBK1Q52WX2 424 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms