RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 ZNF830Q96NB3 372 aaPredicted RBP9.71□□□□□ -0.85
COL6A5-202ENST00000312481 SETDB2Q96T68 719 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 CAPS2Q9BXY5 557 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 SMAPO00193 183 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 POLR2DO15514 142 aaKnown RBP9.71□□□□□ -0.85
COL6A5-202ENST00000312481 MAGEA9P43362 315 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 GRAMD1AQ96CP6 724 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 CSRNP1Q96S65 589 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 PFASO15067 1338 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 CYP7A1P22680 504 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 STAT1P42224 750 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 PDZD4Q76G19 769 aaPredicted RBP9.71□□□□□ -0.85
COL6A5-202ENST00000312481 HVCN1Q96D96 273 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 NDE1Q9NXR1 346 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 HACD3Q9P035 362 aa9.71□□□□□ -0.85
COL6A5-202ENST00000312481 MPRIPQ6WCQ1 1025 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 COPS6Q7L5N1 327 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 RICTORQ6R327 1708 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 DIP2CQ9Y2E4 1556 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 BIN1O00499 593 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 GPAA1O43292 621 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 KPNA2P52292 529 aaKnown RBP9.71□□□□□ -0.86
COL6A5-202ENST00000312481 CEP85LQ5SZL2 805 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 PEX26Q7Z412 305 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 BICD1Q96G01 975 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 TTC25Q96NG3 672 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 ZNF277Q9NRM2 450 aaPredicted RBP9.71□□□□□ -0.86
COL6A5-202ENST00000312481 TMEM63CQ9P1W3 806 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 ERBB3P21860 1342 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 PIK3C2BO00750 1634 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 MIF4GDA9UHW6 222 aaKnown RBP9.71□□□□□ -0.86
COL6A5-202ENST00000312481 NONOQ15233 471 aaKnown RBP eCLIP9.71□□□□□ -0.86
COL6A5-202ENST00000312481 JPH2Q9BR39 696 aaPredicted RBP9.71□□□□□ -0.86
COL6A5-202ENST00000312481 TBC1D7Q9P0N9 293 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 CTTNBP2NLQ9P2B4 639 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 EPS15L1Q9UBC2 864 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 STX8Q9UNK0 236 aa9.71□□□□□ -0.86
COL6A5-202ENST00000312481 SHPRHQ149N8 1683 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 MYH7BA7E2Y1 1941 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 GOLGA8CPA6NN73 597 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 ASPRV1Q53RT3 343 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 LMBR1LQ6UX01 489 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 MAK16Q9BXY0 300 aaKnown RBP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 BCCIPQ9P287 314 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 PPP2R2CQ9Y2T4 447 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 CPS1P31327 1500 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 PFDN6O15212 129 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 ARHGEF18Q6ZSZ5 1173 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 MCUR1Q96AQ8 359 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 TCHPQ9BT92 498 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 ADCY2Q08462 1091 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 PRPF4BQ13523 1007 aaKnown RBP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 PPP2R5AQ15172 486 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 CALCRLQ16602 461 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 A0A1W2PQC6 194 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 OAS2P29728 719 aaKnown RBP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 POLA2Q14181 598 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 RCSD1Q6JBY9 416 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 OGFOD1Q8N543 542 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 DNM3Q9UQ16 869 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 MRVI1Q9Y6F6 885 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 CROCCQ5TZA2 2017 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 EPN1Q9Y6I3 576 aaPredicted RBP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 RGS16O15492 202 aaPredicted RBP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 ARHGAP4P98171 946 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 FKBP3Q00688 224 aaKnown RBP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 MTHFSDQ2M296 383 aaKnown RBP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 ARHGAP18Q8N392 663 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 THUMPD2Q9BTF0 503 aaKnown RBP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 CARD10Q9BWT7 1032 aa9.7□□□□□ -0.86
COL6A5-202ENST00000312481 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.7□□□□□ -0.86
COL6A5-202ENST00000312481 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 ERVV-1B6SEH8 477 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 RAB11FIP4Q86YS3 637 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 PPP4R1Q8TF05 950 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 TBC1D31Q96DN5 1066 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 CCDC17Q96LX7 622 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 MMRN2Q9H8L6 949 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 IFNAR1P17181 557 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 SUPT20HQ8NEM7 779 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 RAB3IL1Q8TBN0 382 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 DDX41Q9UJV9 622 aaKnown RBP9.69□□□□□ -0.86
COL6A5-202ENST00000312481 ARHGEF37A1IGU5 675 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 CASQ2O14958 399 aaPredicted RBP9.69□□□□□ -0.86
COL6A5-202ENST00000312481 ATP2B2Q01814 1243 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 AATFQ9NY61 560 aaKnown RBP eCLIP9.69□□□□□ -0.86
COL6A5-202ENST00000312481 PA2G4Q9UQ80 394 aaKnown RBP9.69□□□□□ -0.86
COL6A5-202ENST00000312481 NEURL1BA8MQ27 555 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 KCNJ18B7U540 433 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 RGL2O15211 777 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 ZBED6P86452 979 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 CUL4BQ13620 913 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 KCNJ12Q14500 433 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 ALX1Q15699 326 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 ITIH6Q6UXX5 1313 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 LSG1Q9H089 658 aaKnown RBP9.69□□□□□ -0.86
COL6A5-202ENST00000312481 COL4A3BPQ9Y5P4 624 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 SNCBQ16143 134 aa9.69□□□□□ -0.86
COL6A5-202ENST00000312481 NBPF5PQ86XG9 351 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms