RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 CCND3P30281 292 aaPredicted RBP9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 MAPK4P31152 587 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 CACNB2Q08289 660 aaPredicted RBP9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 USP17L24Q0WX57 530 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 METTL16Q86W50 562 aaKnown RBP9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 HAUS7Q99871 368 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 LARP6Q9BRS8 491 aaKnown RBP9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 C11orf49Q9H6J7 331 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 ZKSCAN5Q9Y2L8 839 aa9.12□□□□□ -0.95
TM4SF1-201ENST00000305366 ELP1O95163 1332 aa9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 SOX1O00570 391 aaPredicted RBP9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 MYCNP04198 464 aaPredicted RBP9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 RGS2P41220 211 aa9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 SEPT2Q15019 361 aa9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 TATDN1Q6P1N9 297 aa9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 ZNF589Q86UQ0 364 aaPredicted RBP9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 SDR42E1Q8WUS8 393 aa9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.11□□□□□ -0.95
TM4SF1-201ENST00000305366 ZNF532Q9HCE3 1301 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 COL2A1P02458 1487 aaPredicted RBP9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 MYH2Q9UKX2 1941 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 TPM2P07951 284 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 PDE6AP16499 860 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 VCAM1P19320 739 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 TOB2Q14106 344 aaPredicted RBP9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 FOXD4L6Q3SYB3 417 aaPredicted RBP9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 FOXD4L3Q6VB84 417 aaPredicted RBP9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 CATSPERGQ6ZRH7 1159 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 SOCS4Q8WXH5 440 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 DYNLL2Q96FJ2 89 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 RIOK1Q9BRS2 568 aaKnown RBP9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 FUCA2Q9BTY2 467 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 CRNKL1Q9BZJ0 848 aaKnown RBP9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 RPAP3Q9H6T3 665 aaPredicted RBP9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 ARMT1Q9H993 441 aa9.1□□□□□ -0.95
TM4SF1-201ENST00000305366 FIBPO43427 364 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 PRKAB2O43741 272 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 CNMDO75829 334 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 SHMT1P34896 483 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 MNX1P50219 401 aaPredicted RBP9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 USP14P54578 494 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 KRT85P78386 507 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 CCNA1P78396 465 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 ATP2B2Q01814 1243 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 DNM1Q05193 864 aaKnown RBP9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 PLS1Q14651 629 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 TTF1Q15361 905 aaPredicted RBP9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 MCMDC2Q4G0Z9 681 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 LARP1BQ659C4 914 aaKnown RBP9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 STK11IPQ8N1F8 1099 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 LCORLQ8N3X6 602 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 SLC44A5Q8NCS7 719 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 RNF214Q8ND24 703 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 TANGO6Q9C0B7 1094 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 GINM1Q9NU53 330 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 FLRT1Q9NZU1 646 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 BTBD7Q9P203 1132 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 RABGAP1Q9Y3P9 1069 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 CEP290O15078 2479 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 LAMB1P07942 1786 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 MYH13Q9UKX3 1938 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 CYP2D7A0A087X1C5 515 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 CHGBP05060 677 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 XRCC5P13010 732 aaKnown RBP9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 CYP2C19P33261 490 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 GUCY1A2P33402 732 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 MAP2K5Q13163 448 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 MORN1Q5T089 497 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 MFSD14CQ5VZR4 134 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 CLEC10AQ8IUN9 316 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 SPICE1Q8N0Z3 855 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 NECAB1Q8N987 351 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 KBTBD3Q8NAB2 608 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 ANKLE1Q8NAG6 615 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 NEK1Q96PY6 1258 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 SENP6Q9GZR1 1112 aaPredicted RBP9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 KIAA1683Q9H0B3 1180 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 PRO3102Q9H379 93 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 OGDHLQ9ULD0 1010 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 IVNS1ABPQ9Y6Y0 642 aa9.09□□□□□ -0.95
TM4SF1-201ENST00000305366 TRIOBPQ9H2D6 2365 aa9.09□□□□□ -0.96
TM4SF1-201ENST00000305366 TCHHQ07283 1943 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 A0A1W2PRG0 241 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 VPS37CA5D8V6 355 aaPredicted RBP9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 SMIM22K7EJ46 135 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 PTPREP23469 700 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 MAGEA10P43363 369 aaPredicted RBP9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 ATN1P54259 1190 aaPredicted RBP9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 MDM2Q00987 491 aaPredicted RBP9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 MAP3K21Q5TCX8 1036 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 TMCO4Q5TGY1 634 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 ANO1Q5XXA6 986 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 DPP9Q86TI2 863 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 TRMT44Q8IYL2 757 aaKnown RBP9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 NPLOC4Q8TAT6 608 aa9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 GTF3C2Q8WUA4 911 aaPredicted RBP9.08□□□□□ -0.96
TM4SF1-201ENST00000305366 USP6NLQ92738 828 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms