RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 OLFML2BQ68BL8 750 aa31.24■■■□□ 2.59
CDKN2A-201ENST00000304494 MMP19Q99542 508 aa31.24■■■□□ 2.59
CDKN2A-201ENST00000304494 ISY1Q9ULR0 285 aaKnown RBP31.24■■■□□ 2.59
CDKN2A-201ENST00000304494 ATP2A1O14983 1001 aa31.23■■■□□ 2.59
CDKN2A-201ENST00000304494 STAT2P52630 851 aa31.23■■■□□ 2.59
CDKN2A-201ENST00000304494 KCTD2Q14681 263 aa31.23■■■□□ 2.59
CDKN2A-201ENST00000304494 DSCC1Q9BVC3 393 aa31.23■■■□□ 2.59
CDKN2A-201ENST00000304494 TCP11L1Q9NUJ3 509 aa31.23■■■□□ 2.59
CDKN2A-201ENST00000304494 COBLO75128 1261 aa31.22■■■□□ 2.59
CDKN2A-201ENST00000304494 FDX1P10109 184 aa31.22■■■□□ 2.59
CDKN2A-201ENST00000304494 CCND3P30281 292 aaPredicted RBP31.22■■■□□ 2.59
CDKN2A-201ENST00000304494 NT5C2P49902 561 aa31.22■■■□□ 2.59
CDKN2A-201ENST00000304494 SNRNP48Q6IEG0 339 aaKnown RBP31.22■■■□□ 2.59
CDKN2A-201ENST00000304494 FAM160B2Q86V87 743 aa31.22■■■□□ 2.59
CDKN2A-201ENST00000304494 CHURC1Q8WUH1 139 aa31.22■■■□□ 2.59
CDKN2A-201ENST00000304494 SLC38A10Q9HBR0 1119 aa31.22■■■□□ 2.59
CDKN2A-201ENST00000304494 OGDHLQ9ULD0 1010 aa31.22■■■□□ 2.59
CDKN2A-201ENST00000304494 TMEM232C9JQI7 657 aa31.21■■■□□ 2.59
CDKN2A-201ENST00000304494 MCCP23508 829 aa31.21■■■□□ 2.59
CDKN2A-201ENST00000304494 TBC1D10CQ8IV04 446 aa31.21■■■□□ 2.59
CDKN2A-201ENST00000304494 DPF3Q92784 378 aa31.21■■■□□ 2.59
CDKN2A-201ENST00000304494 NBPF3Q9H094 633 aa31.21■■■□□ 2.59
CDKN2A-201ENST00000304494 CTNNA3Q9UI47 895 aa31.21■■■□□ 2.59
CDKN2A-201ENST00000304494 IGHA2P01877 340 aa31.2■■■□□ 2.59
CDKN2A-201ENST00000304494 CYP2C19P33261 490 aa31.2■■■□□ 2.59
CDKN2A-201ENST00000304494 OAZ1P54368 228 aa31.2■■■□□ 2.59
CDKN2A-201ENST00000304494 IKQ13123 557 aaPredicted RBP31.2■■■□□ 2.59
CDKN2A-201ENST00000304494 NECAB2Q7Z6G3 386 aa31.2■■■□□ 2.59
CDKN2A-201ENST00000304494 RCSD1Q6JBY9 416 aa31.19■■■□□ 2.58
CDKN2A-201ENST00000304494 CPXCR1Q8N123 301 aa31.19■■■□□ 2.58
CDKN2A-201ENST00000304494 RUFY2Q8WXA3 655 aa31.19■■■□□ 2.58
CDKN2A-201ENST00000304494 ESR2Q92731 530 aa31.19■■■□□ 2.58
CDKN2A-201ENST00000304494 RAD50Q92878 1312 aa31.19■■■□□ 2.58
CDKN2A-201ENST00000304494 MSCO60682 206 aa31.18■■■□□ 2.58
CDKN2A-201ENST00000304494 PLA2G6O60733 806 aa31.18■■■□□ 2.58
CDKN2A-201ENST00000304494 TOP1P11387 765 aaKnown RBP31.18■■■□□ 2.58
CDKN2A-201ENST00000304494 IMMTQ16891 758 aaKnown RBP31.18■■■□□ 2.58
CDKN2A-201ENST00000304494 PAWRQ96IZ0 340 aaKnown RBP31.18■■■□□ 2.58
CDKN2A-201ENST00000304494 MAML3Q96JK9 1138 aa31.18■■■□□ 2.58
CDKN2A-201ENST00000304494 LHX8Q68G74 356 aa31.17■■■□□ 2.58
CDKN2A-201ENST00000304494 DCAF4Q8WV16 495 aa31.17■■■□□ 2.58
CDKN2A-201ENST00000304494 TTC14Q96N46 770 aa31.17■■■□□ 2.58
CDKN2A-201ENST00000304494 RAVER2Q9HCJ3 691 aaKnown RBP31.17■■■□□ 2.58
CDKN2A-201ENST00000304494 DIS3Q9Y2L1 958 aaKnown RBP31.17■■■□□ 2.58
CDKN2A-201ENST00000304494 CNGA1P29973 690 aa31.16■■■□□ 2.58
CDKN2A-201ENST00000304494 KCTD1Q719H9 257 aa31.16■■■□□ 2.58
CDKN2A-201ENST00000304494 TMEM47Q9BQJ4 181 aa31.16■■■□□ 2.58
CDKN2A-201ENST00000304494 RIPK3Q9Y572 518 aa31.16■■■□□ 2.58
CDKN2A-201ENST00000304494 LAMA4Q16363 1823 aa31.16■■■□□ 2.58
CDKN2A-201ENST00000304494 PGK2P07205 417 aa31.15■■■□□ 2.58
CDKN2A-201ENST00000304494 CYBAP13498 195 aa31.15■■■□□ 2.58
CDKN2A-201ENST00000304494 SLC4A3P48751 1232 aa31.15■■■□□ 2.58
CDKN2A-201ENST00000304494 DIS3LQ8TF46 1054 aaKnown RBP31.15■■■□□ 2.58
CDKN2A-201ENST00000304494 CHMP4CQ96CF2 233 aa31.15■■■□□ 2.58
CDKN2A-201ENST00000304494 FBXO40Q9UH90 709 aa31.15■■■□□ 2.58
CDKN2A-201ENST00000304494 DDX20Q9UHI6 824 aaKnown RBP31.15■■■□□ 2.58
CDKN2A-201ENST00000304494 MTMR7Q9Y216 660 aa31.15■■■□□ 2.58
CDKN2A-201ENST00000304494 NEDD4P46934 1319 aa31.15■■■□□ 2.58
CDKN2A-201ENST00000304494 CHMLP26374 656 aa31.13■■■□□ 2.57
CDKN2A-201ENST00000304494 CCDC96Q2M329 555 aa31.13■■■□□ 2.57
CDKN2A-201ENST00000304494 ZNF792Q3KQV3 632 aa31.13■■■□□ 2.57
CDKN2A-201ENST00000304494 CCDC178Q5BJE1 867 aa31.13■■■□□ 2.57
CDKN2A-201ENST00000304494 CHST13Q8NET6 341 aa31.13■■■□□ 2.57
CDKN2A-201ENST00000304494 DDX11Q96FC9 970 aa31.13■■■□□ 2.57
CDKN2A-201ENST00000304494 IL25Q9H293 177 aa31.13■■■□□ 2.57
CDKN2A-201ENST00000304494 C11orf49Q9H6J7 331 aa31.13■■■□□ 2.57
CDKN2A-201ENST00000304494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.12■■■□□ 2.57
CDKN2A-201ENST00000304494 IQCA1Q86XH1 822 aa31.12■■■□□ 2.57
CDKN2A-201ENST00000304494 TRPV1Q8NER1 839 aa31.12■■■□□ 2.57
CDKN2A-201ENST00000304494 NR2E3Q9Y5X4 410 aa31.12■■■□□ 2.57
CDKN2A-201ENST00000304494 MNX1P50219 401 aaPredicted RBP31.11■■■□□ 2.57
CDKN2A-201ENST00000304494 NRBP1Q9UHY1 535 aa31.11■■■□□ 2.57
CDKN2A-201ENST00000304494 PRR12Q9ULL5 1215 aa31.11■■■□□ 2.57
CDKN2A-201ENST00000304494 H0YGN5 161 aa31.1■■■□□ 2.57
CDKN2A-201ENST00000304494 EVI5O60447 810 aa31.1■■■□□ 2.57
CDKN2A-201ENST00000304494 CENPQQ7L2Z9 268 aaPredicted RBP31.1■■■□□ 2.57
CDKN2A-201ENST00000304494 RASGRP2Q7LDG7 609 aa31.1■■■□□ 2.57
CDKN2A-201ENST00000304494 DGKHQ86XP1 1220 aa31.1■■■□□ 2.57
CDKN2A-201ENST00000304494 TINF2Q9BSI4 451 aa31.1■■■□□ 2.57
CDKN2A-201ENST00000304494 KRT23Q9C075 422 aa31.1■■■□□ 2.57
CDKN2A-201ENST00000304494 CNNM2Q9H8M5 875 aa31.1■■■□□ 2.57
CDKN2A-201ENST00000304494 ZNFX1Q9P2E3 1918 aaKnown RBP31.09■■■□□ 2.57
CDKN2A-201ENST00000304494 SEPT4O43236 478 aa31.09■■■□□ 2.57
CDKN2A-201ENST00000304494 KDM4AO75164 1064 aa31.09■■■□□ 2.57
CDKN2A-201ENST00000304494 TKFCQ3LXA3 575 aa31.09■■■□□ 2.57
CDKN2A-201ENST00000304494 ANKRD35Q8N283 1001 aa31.09■■■□□ 2.57
CDKN2A-201ENST00000304494 MSL3Q8N5Y2 521 aaKnown RBP31.09■■■□□ 2.57
CDKN2A-201ENST00000304494 DNAJC25-GNG10A0A024R161 153 aa31.08■■■□□ 2.57
CDKN2A-201ENST00000304494 ZKSCAN3Q9BRR0 538 aa31.08■■■□□ 2.57
CDKN2A-201ENST00000304494 ACAD9Q9H845 621 aa31.08■■■□□ 2.57
CDKN2A-201ENST00000304494 ZNF536O15090 1300 aa31.07■■■□□ 2.56
CDKN2A-201ENST00000304494 B4E1Z4 1266 aa31.07■■■□□ 2.56
CDKN2A-201ENST00000304494 PDHBP11177 359 aa31.07■■■□□ 2.56
CDKN2A-201ENST00000304494 BTNL9Q6UXG8 535 aa31.07■■■□□ 2.56
CDKN2A-201ENST00000304494 HOMER2Q9NSB8 354 aa31.07■■■□□ 2.56
CDKN2A-201ENST00000304494 PRAMEF19Q5SWL8 479 aa31.06■■■□□ 2.56
CDKN2A-201ENST00000304494 CCDC174Q6PII3 467 aa31.06■■■□□ 2.56
CDKN2A-201ENST00000304494 ZNF467Q7Z7K2 595 aaPredicted RBP31.06■■■□□ 2.56
CDKN2A-201ENST00000304494 AGBL1Q96MI9 1066 aa31.06■■■□□ 2.56
CDKN2A-201ENST00000304494 PLXNA1Q9UIW2 1896 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms