RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 B4DLN1 442 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 MBD4O95243 580 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 IRF2BP1Q8IU81 584 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 ZIM3Q96PE6 472 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 CAPN11Q9UMQ6 739 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 PRKAB2O43741 272 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 CSB-PGBD3P0DP91 1061 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 KRT2P35908 639 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 AKNAD1Q5T1N1 836 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 CCDC181Q5TID7 509 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 CREG2Q8IUH2 290 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 SPATA4Q8NEY3 305 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 MLXIPQ9HAP2 919 aa14.56□□□□□ -0.08
TVP23A-201ENST00000299866 RPN1P04843 607 aaKnown RBP14.55□□□□□ -0.08
TVP23A-201ENST00000299866 SEC24CP53992 1094 aa14.55□□□□□ -0.08
TVP23A-201ENST00000299866 PMS1P54277 932 aaKnown RBP14.55□□□□□ -0.08
TVP23A-201ENST00000299866 IFIT5Q13325 482 aaKnown RBP14.55□□□□□ -0.08
TVP23A-201ENST00000299866 RNPC3Q96LT9 517 aaKnown RBP14.55□□□□□ -0.08
TVP23A-201ENST00000299866 LGALS16A8MUM7 142 aa14.55□□□□□ -0.08
TVP23A-201ENST00000299866 ACTN3Q08043 901 aaPredicted RBP14.55□□□□□ -0.08
TVP23A-201ENST00000299866 ZNF658Q5TYW1 1059 aaPredicted RBP14.55□□□□□ -0.08
TVP23A-201ENST00000299866 NFRKBQ6P4R8 1299 aa14.55□□□□□ -0.08
TVP23A-201ENST00000299866 LDHAL6AQ6ZMR3 332 aa14.55□□□□□ -0.08
TVP23A-201ENST00000299866 ZNF654Q8IZM8 581 aa14.55□□□□□ -0.08
TVP23A-201ENST00000299866 FERMT2Q96AC1 680 aa14.55□□□□□ -0.08
TVP23A-201ENST00000299866 TRIM47Q96LD4 638 aa14.55□□□□□ -0.08
TVP23A-201ENST00000299866 MOCS3O95396 460 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 GPTP24298 496 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 EPHB4P54760 987 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 IFT88Q13099 833 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 TTC38Q5R3I4 469 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 ANKLE2Q86XL3 938 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 MMGT1Q8N4V1 131 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 ORAI2Q96SN7 254 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 MAGEC2Q9UBF1 373 aaPredicted RBP14.54□□□□□ -0.08
TVP23A-201ENST00000299866 SNX12Q9UMY4 172 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 V9GY48 417 aaPredicted RBP14.54□□□□□ -0.08
TVP23A-201ENST00000299866 GTPBP6O43824 516 aaPredicted RBP14.54□□□□□ -0.08
TVP23A-201ENST00000299866 XBP1P17861 261 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 DNA2P51530 1060 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 UBE3CQ15386 1083 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 SYNE4Q8N205 404 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 IFT81Q8WYA0 676 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 CCDC43Q96MW1 224 aaKnown RBP14.54□□□□□ -0.08
TVP23A-201ENST00000299866 KRT23Q9C075 422 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 CAPN6Q9Y6Q1 641 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 ANO9A1A5B4 782 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 PATL2C9JE40 543 aaKnown RBP14.54□□□□□ -0.08
TVP23A-201ENST00000299866 H7C1D1 291 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 SSBP05455 408 aaKnown RBP eCLIP14.54□□□□□ -0.08
TVP23A-201ENST00000299866 LSP1P33241 339 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 PHKA1P46020 1223 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 SKOR1P84550 965 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 NAA35Q5VZE5 725 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 MAGEB6Q8N7X4 407 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 ZKSCAN4Q969J2 545 aaPredicted RBP14.54□□□□□ -0.08
TVP23A-201ENST00000299866 CNNM1Q9NRU3 951 aa14.54□□□□□ -0.08
TVP23A-201ENST00000299866 NCK2O43639 380 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 FSBPO95073 299 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 PLEKP08567 350 aaPredicted RBP14.53□□□□□ -0.08
TVP23A-201ENST00000299866 SCP2P22307 547 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 MCM7P33993 719 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 SPA17Q15506 151 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 CFAP58Q5T655 872 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 PLIN2Q99541 437 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 ESYT3A0FGR9 886 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 CYP27B1O15528 508 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 TACC1O75410 805 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 NAP1L1P55209 391 aaKnown RBP14.53□□□□□ -0.08
TVP23A-201ENST00000299866 TBC1D8BQ0IIM8 1120 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 ALS2CLQ60I27 953 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 MICALCLQ6ZW33 695 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 ANKRD13CQ8N6S4 541 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 RASSF8Q8NHQ8 419 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 CCDC42Q96M95 316 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 CNNM2Q9H8M5 875 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 STIM2Q9P246 746 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 ZPR1O75312 459 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 GUCY2FP51841 1108 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 SF3B2Q13435 895 aaKnown RBP14.53□□□□□ -0.08
TVP23A-201ENST00000299866 C8orf74Q6P047 294 aa14.53□□□□□ -0.08
TVP23A-201ENST00000299866 ZNF473Q8WTR7 871 aaKnown RBP14.53□□□□□ -0.08
TVP23A-201ENST00000299866 HDLBPQ00341 1268 aaKnown RBP14.52□□□□□ -0.08
TVP23A-201ENST00000299866 PDXDC2PQ6P474 469 aa14.52□□□□□ -0.08
TVP23A-201ENST00000299866 CEP57Q86XR8 500 aa14.52□□□□□ -0.08
TVP23A-201ENST00000299866 ZNF507Q8TCN5 953 aa14.52□□□□□ -0.08
TVP23A-201ENST00000299866 DCAF5Q96JK2 942 aa14.52□□□□□ -0.08
TVP23A-201ENST00000299866 CLGNO14967 610 aa14.52□□□□□ -0.09
TVP23A-201ENST00000299866 CHUKO15111 745 aa14.52□□□□□ -0.09
TVP23A-201ENST00000299866 ECM2O94769 699 aaPredicted RBP14.52□□□□□ -0.09
TVP23A-201ENST00000299866 HAUS3Q68CZ6 603 aa14.52□□□□□ -0.09
TVP23A-201ENST00000299866 EMBQ6PCB8 327 aa14.52□□□□□ -0.09
TVP23A-201ENST00000299866 FNBP4Q8N3X1 1017 aaPredicted RBP14.52□□□□□ -0.09
TVP23A-201ENST00000299866 HELBQ8NG08 1087 aaPredicted RBP14.52□□□□□ -0.09
TVP23A-201ENST00000299866 OSBPL9Q96SU4 736 aa14.52□□□□□ -0.09
TVP23A-201ENST00000299866 KLC4Q9NSK0 619 aa14.52□□□□□ -0.09
TVP23A-201ENST00000299866 NFU1Q9UMS0 254 aa14.52□□□□□ -0.09
TVP23A-201ENST00000299866 ZNF263O14978 683 aa14.51□□□□□ -0.09
TVP23A-201ENST00000299866 FAM153BP0C7A2 387 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms