RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 LRWD1Q9UFC0 647 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 C4AP0C0L4 1744 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 C4BP0C0L5 1744 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 NFAT5O94916 1531 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 SSBP05455 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
LMX1A-201ENST00000294816 GPTP24298 496 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 SH3RF1Q7Z6J0 888 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 ANKLE2Q86XL3 938 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 AMOTL1Q8IY63 956 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 MIGA1Q8NAN2 632 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 BANK1Q8NDB2 785 aa11.48□□□□□ -0.57
LMX1A-201ENST00000294816 NHEJ1Q9H9Q4 299 aaPredicted RBP11.48□□□□□ -0.57
LMX1A-201ENST00000294816 MARF1Q9Y4F3 1742 aaKnown RBP11.47□□□□□ -0.57
LMX1A-201ENST00000294816 ZPR1O75312 459 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 KRT14P02533 472 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 RPN1P04843 607 aaKnown RBP11.47□□□□□ -0.57
LMX1A-201ENST00000294816 DHX37Q8IY37 1157 aaKnown RBP11.47□□□□□ -0.57
LMX1A-201ENST00000294816 FERMT2Q96AC1 680 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 CNNM2Q9H8M5 875 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 MLXIPQ9HAP2 919 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 TACC3Q9Y6A5 838 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 GRIN2DO15399 1336 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 C5P01031 1676 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 CYP27B1O15528 508 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 GUCY1A3Q02108 690 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 WDR59Q6PJI9 974 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 ANKRD13CQ8N6S4 541 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 AENQ8WTP8 325 aaKnown RBP11.47□□□□□ -0.57
LMX1A-201ENST00000294816 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 CCDC42Q96M95 316 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 SLC4A4Q9Y6R1 1079 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 PATL2C9JE40 543 aaKnown RBP11.47□□□□□ -0.57
LMX1A-201ENST00000294816 TACC1O75410 805 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 MOCS3O95396 460 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 CCDC172P0C7W6 258 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 STAT6P42226 847 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 MTIF2P46199 727 aaKnown RBP11.47□□□□□ -0.57
LMX1A-201ENST00000294816 GUCY2FP51841 1108 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 APBA1Q02410 837 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 TBC1D8BQ0IIM8 1120 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 NNTQ13423 1086 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 UBE3CQ15386 1083 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 CHRNA2Q15822 529 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 TTMPQ5BVD1 217 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 NFRKBQ6P4R8 1299 aa11.47□□□□□ -0.57
LMX1A-201ENST00000294816 GTPBP6O43824 516 aaPredicted RBP11.46□□□□□ -0.57
LMX1A-201ENST00000294816 ATP2C2O75185 946 aa11.46□□□□□ -0.57
LMX1A-201ENST00000294816 CFAP58Q5T655 872 aa11.46□□□□□ -0.57
LMX1A-201ENST00000294816 ZNF658Q5TYW1 1059 aaPredicted RBP11.46□□□□□ -0.57
LMX1A-201ENST00000294816 C8orf74Q6P047 294 aa11.46□□□□□ -0.57
LMX1A-201ENST00000294816 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.57
LMX1A-201ENST00000294816 CCDC43Q96MW1 224 aaKnown RBP11.46□□□□□ -0.57
LMX1A-201ENST00000294816 ESYT3A0FGR9 886 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 LGALS16A8MUM7 142 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 NCK2O43639 380 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 USO1O60763 962 aaKnown RBP11.46□□□□□ -0.58
LMX1A-201ENST00000294816 HPDP32754 393 aaPredicted RBP11.46□□□□□ -0.58
LMX1A-201ENST00000294816 PAFAH1B1P43034 410 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 IFT88Q13099 833 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 TYW1BQ6NUM6 668 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 CEP57Q86XR8 500 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 NACAP1Q9BZK3 213 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 RMND1Q9NWS8 449 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 SUFUQ9UMX1 484 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 MST1RQ04912 1400 aa11.46□□□□□ -0.58
LMX1A-201ENST00000294816 WDR17Q8IZU2 1322 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 LRRC10BA6NIK2 292 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 H7C1D1 291 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 SNAP23O00161 211 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 SEC24CP53992 1094 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 PMS1P54277 932 aaKnown RBP11.45□□□□□ -0.58
LMX1A-201ENST00000294816 RNASE9P60153 205 aaKnown RBP11.45□□□□□ -0.58
LMX1A-201ENST00000294816 ACTN3Q08043 901 aaPredicted RBP11.45□□□□□ -0.58
LMX1A-201ENST00000294816 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 ZIM3Q96PE6 472 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 CAPN11Q9UMQ6 739 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 PLEKHA8P1O95397 391 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 PLEKP08567 350 aaPredicted RBP11.45□□□□□ -0.58
LMX1A-201ENST00000294816 ERCC3P19447 782 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 ITGA6P23229 1130 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 EPHB4P54760 987 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 MICALCLQ6ZW33 695 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 MAATS1Q7Z4T9 603 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 CNPY4Q8N129 248 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 CEP83Q9Y592 693 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 CAPN6Q9Y6Q1 641 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 MEFVO15553 781 aaPredicted RBP11.45□□□□□ -0.58
LMX1A-201ENST00000294816 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
LMX1A-201ENST00000294816 CDR1P51861 262 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 NLRP5P59047 1200 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 MAP3K12Q12852 859 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 RNPC3Q96LT9 517 aaKnown RBP11.45□□□□□ -0.58
LMX1A-201ENST00000294816 DNAJC7Q99615 494 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 IFIH1Q9BYX4 1025 aaKnown RBP11.45□□□□□ -0.58
LMX1A-201ENST00000294816 SNX12Q9UMY4 172 aa11.45□□□□□ -0.58
LMX1A-201ENST00000294816 NUTM2BA6NNL0 878 aaPredicted RBP11.44□□□□□ -0.58
LMX1A-201ENST00000294816 NUTM2EB1AL46 878 aaPredicted RBP11.44□□□□□ -0.58
LMX1A-201ENST00000294816 AKR1B10O60218 316 aa11.44□□□□□ -0.58
LMX1A-201ENST00000294816 VAV2P52735 878 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms