RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 RRP1BQ14684 758 aaKnown RBP10.46□□□□□ -0.74
PDPN-201ENST00000294489 WWC2Q6AWC2 1192 aa10.46□□□□□ -0.74
PDPN-201ENST00000294489 USP17L2Q6R6M4 530 aa10.46□□□□□ -0.74
PDPN-201ENST00000294489 C11orf57Q6ZUT1 292 aaPredicted RBP10.46□□□□□ -0.74
PDPN-201ENST00000294489 GMCL1P1Q8NEA9 526 aa10.46□□□□□ -0.74
PDPN-201ENST00000294489 PIBF1Q8WXW3 757 aa10.46□□□□□ -0.74
PDPN-201ENST00000294489 MYOZ2Q9NPC6 264 aa10.46□□□□□ -0.74
PDPN-201ENST00000294489 TMOD2Q9NZR1 351 aa10.46□□□□□ -0.74
PDPN-201ENST00000294489 CLIP2Q9UDT6 1046 aa10.46□□□□□ -0.74
PDPN-201ENST00000294489 PCDHA4Q9UN74 947 aa10.46□□□□□ -0.74
PDPN-201ENST00000294489 SRPRBQ9Y5M8 271 aaKnown RBP10.46□□□□□ -0.74
PDPN-201ENST00000294489 BAZ2BQ9UIF8 2168 aaKnown RBP10.45□□□□□ -0.74
PDPN-201ENST00000294489 ESYT2A0FGR8 921 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 SLURP2P0DP57 97 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 TYW1BQ6NUM6 668 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 RASGRP2Q7LDG7 609 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 DCAF4Q8WV16 495 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 ERCC4Q92889 916 aaPredicted RBP10.45□□□□□ -0.74
PDPN-201ENST00000294489 ZMYND12Q9H0C1 365 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 FBXO2Q9UK22 296 aaPredicted RBP10.45□□□□□ -0.74
PDPN-201ENST00000294489 WNT10BO00744 389 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 ADAMTS3O15072 1205 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 AP5Z1O43299 807 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 TPM3P06753 285 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 JAG1P78504 1218 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 IQCB1Q15051 598 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 GPATCH4Q5T3I0 446 aaKnown RBP10.45□□□□□ -0.74
PDPN-201ENST00000294489 CNNM3Q8NE01 707 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 TRIM5Q9C035 493 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 BCS1LQ9Y276 419 aa10.45□□□□□ -0.74
PDPN-201ENST00000294489 RASSF7Q02833 373 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 ELOA2Q8IYF1 753 aaPredicted RBP10.44□□□□□ -0.74
PDPN-201ENST00000294489 CCDC148Q8NFR7 591 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 CSRNP1Q96S65 589 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 MTMR7Q9Y216 660 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 GOLGA8HP0CJ92 632 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 EEF2P13639 858 aaKnown RBP10.44□□□□□ -0.74
PDPN-201ENST00000294489 ABCB5Q2M3G0 1257 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 CLEC10AQ8IUN9 316 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 BLIDQ8IZY5 108 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 LRRC47Q8N1G4 583 aaKnown RBP10.44□□□□□ -0.74
PDPN-201ENST00000294489 RRP36Q96EU6 259 aaKnown RBP10.44□□□□□ -0.74
PDPN-201ENST00000294489 CCDC34Q96HJ3 373 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 GMCL1Q96IK5 515 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 NLRP12P59046 1061 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 SHROOM1Q2M3G4 852 aaPredicted RBP10.44□□□□□ -0.74
PDPN-201ENST00000294489 TTC38Q5R3I4 469 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 PPP1R18Q6NYC8 613 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 KRBA2Q6ZNG9 492 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 FERMT2Q96AC1 680 aa10.44□□□□□ -0.74
PDPN-201ENST00000294489 DOCK1Q14185 1865 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 PAPPA2Q9BXP8 1791 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 FAM205CA6NFA0 338 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 FAM196BA6NMK8 535 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 TCP10L2B9ZVM9 353 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.43□□□□□ -0.74
PDPN-201ENST00000294489 ZSCAN29Q8IWY8 852 aaPredicted RBP10.43□□□□□ -0.74
PDPN-201ENST00000294489 BPIFA3Q9BQP9 254 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 SPON1Q9HCB6 807 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.43□□□□□ -0.74
PDPN-201ENST00000294489 PCDHA6Q9UN73 950 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 PCDHA8Q9Y5H6 950 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 SHTN1A0MZ66 631 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 CLRN2A0PK11 232 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 ZNF500O60304 480 aaPredicted RBP10.43□□□□□ -0.74
PDPN-201ENST00000294489 SEPT2Q15019 361 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 NBPF9Q3BBW0 867 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 LONRF3Q496Y0 759 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 SPECC1Q5M775 1068 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 PIK3AP1Q6ZUJ8 805 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 DRC7Q8IY82 874 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 CCDC12Q8WUD4 166 aaPredicted RBP10.43□□□□□ -0.74
PDPN-201ENST00000294489 GPKOWQ92917 476 aaPredicted RBP eCLIP10.43□□□□□ -0.74
PDPN-201ENST00000294489 TEPSINQ96N21 525 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 JMJD4Q9H9V9 463 aa10.43□□□□□ -0.74
PDPN-201ENST00000294489 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.43□□□□□ -0.74
PDPN-201ENST00000294489 BIN1O00499 593 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 MYO1BO43795 1136 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 ZNF75DP51815 510 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 TPM4P67936 248 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 DPCR1Q3MIW9 517 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 NOM1Q5C9Z4 860 aaKnown RBP10.42□□□□□ -0.74
PDPN-201ENST00000294489 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
PDPN-201ENST00000294489 KANK3Q6NY19 840 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 SARM1Q6SZW1 724 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 BTNL9Q6UXG8 535 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 PLA2G4DQ86XP0 818 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 C4orf32Q8N8J7 132 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 TRIM34Q9BYJ4 488 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.42□□□□□ -0.74
PDPN-201ENST00000294489 TUBE1Q9UJT0 475 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 PHIPQ8WWQ0 1821 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 A0A087WWV3 80 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 PNMA6FA0A0J9YX94 578 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 MPHOSPH10O00566 681 aaKnown RBP10.42□□□□□ -0.74
PDPN-201ENST00000294489 WNT7AO00755 349 aa10.42□□□□□ -0.74
PDPN-201ENST00000294489 POLR2DO15514 142 aaKnown RBP10.42□□□□□ -0.74
PDPN-201ENST00000294489 GMPSP49915 693 aaPredicted RBP10.42□□□□□ -0.74
PDPN-201ENST00000294489 ATP2C1P98194 919 aaPredicted RBP10.42□□□□□ -0.74
PDPN-201ENST00000294489 GRIN1Q05586 938 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms