RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 JAKMIP3Q5VZ66 844 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 ADALQ6DHV7 355 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 KCNG4Q8TDN1 519 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 MRPS27Q92552 414 aaKnown RBP12.59□□□□□ -0.39
GGPS1-201ENST00000282841 MYO1BO43795 1136 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 YEATS4O95619 227 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 EPS15P42566 896 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 ZNF543Q08ER8 600 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 INF2Q27J81 1249 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
GGPS1-201ENST00000282841 SLFN13Q68D06 897 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 TRPM4Q8TD43 1214 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 FAM151AQ8WW52 585 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 RRP36Q96EU6 259 aaKnown RBP12.59□□□□□ -0.39
GGPS1-201ENST00000282841 JMJD4Q9H9V9 463 aa12.59□□□□□ -0.39
GGPS1-201ENST00000282841 F5H6K3 240 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
GGPS1-201ENST00000282841 KLRC3Q07444 240 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 MAP3K11Q16584 847 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 BLIDQ8IZY5 108 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 ENGASEQ8NFI3 743 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 TNFRSF25Q93038 417 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 SDF4Q9BRK5 362 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 CLSTN2Q9H4D0 955 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 SEC63Q9UGP8 760 aaKnown RBP12.58□□□□□ -0.4
GGPS1-201ENST00000282841 HACL1Q9UJ83 578 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 SMCO2A6NFE2 343 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 FOXN1O15353 648 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 YBX3P16989 372 aaKnown RBP eCLIP12.58□□□□□ -0.42e-7■■□□□ 13
GGPS1-201ENST00000282841 GNAQP50148 359 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 SYT17Q9BSW7 474 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 KANSL2Q9H9L4 492 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 BARHL2Q9NY43 387 aa12.58□□□□□ -0.4
GGPS1-201ENST00000282841 KINO60870 393 aaKnown RBP12.57□□□□□ -0.4
GGPS1-201ENST00000282841 NOVP48745 357 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 FAM160A1Q05DH4 1040 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 UBE2SQ16763 222 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 FMR1NBQ8N0W7 255 aaPredicted RBP12.57□□□□□ -0.4
GGPS1-201ENST00000282841 EPSTI1Q96J88 318 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 BRMS1Q9HCU9 246 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 MYH4Q9Y623 1939 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 TRIM75PA6NK02 468 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 FZD9O00144 591 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 NDUFB10O96000 172 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 PTGDRQ13258 359 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 USH1GQ495M9 461 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 RILPL1Q5EBL4 403 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 NBPF12Q5TAG4 269 aaPredicted RBP12.57□□□□□ -0.4
GGPS1-201ENST00000282841 GRAMD1CQ8IYS0 662 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 CCDC17Q96LX7 622 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 CSRNP2Q9H175 543 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 PCDHA6Q9UN73 950 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 PCDHA8Q9Y5H6 950 aa12.57□□□□□ -0.4
GGPS1-201ENST00000282841 VWA3AA6NCI4 1184 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 TMEM232C9JQI7 657 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 ZNF202O95125 648 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 TTC38Q5R3I4 469 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 ANGEL2Q5VTE6 544 aaKnown RBP12.56□□□□□ -0.4
GGPS1-201ENST00000282841 ATL3Q6DD88 541 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 TMEM179Q6ZVK1 233 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 PCDHA4Q9UN74 947 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 PLIN4Q96Q06 1357 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 SMCHD1A6NHR9 2005 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 TYRO3Q06418 890 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
GGPS1-201ENST00000282841 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.56□□□□□ -0.4
GGPS1-201ENST00000282841 SPZ1Q9BXG8 430 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 DEFB129Q9H1M3 183 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 DNAJC25Q9H1X3 360 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 FBXO2Q9UK22 296 aaPredicted RBP12.56□□□□□ -0.4
GGPS1-201ENST00000282841 ATRNL1Q5VV63 1379 aa12.56□□□□□ -0.4
GGPS1-201ENST00000282841 SNHG28P0DPA3 235 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 LONRF3Q496Y0 759 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 ANO6Q4KMQ2 910 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 LUZP1Q86V48 1076 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 KRI1Q8N9T8 703 aaKnown RBP12.55□□□□□ -0.4
GGPS1-201ENST00000282841 GJA10Q969M2 543 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 ZBED3Q96IU2 234 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-201ENST00000282841 FUCA2Q9BTY2 467 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 DDX19AQ9NUU7 478 aaKnown RBP12.55□□□□□ -0.4
GGPS1-201ENST00000282841 CCDC194A0A1B0GVG4 234 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 CASP1P29466 404 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 HIRAP54198 1017 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-201ENST00000282841 STAMQ92783 540 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 PLIN2Q99541 437 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 RIOX1Q9H6W3 641 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 RNF181Q9P0P0 153 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 ZBTB21Q9ULJ3 1066 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 CENPFP49454 3210 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 PSME4Q14997 1843 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 INPP5BP32019 993 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 SYKP43405 635 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 IL17AQ16552 155 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 LETM2Q2VYF4 491 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 ASPRV1Q53RT3 343 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 FAM83BQ5T0W9 1011 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 VPS33BQ9H267 617 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 FBXO28Q9NVF7 368 aa12.55□□□□□ -0.4
GGPS1-201ENST00000282841 PP2D1A8MPX8 630 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms