RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 PUS7LQ9H0K6 701 aaKnown RBP10.27□□□□□ -0.77
HMGCLL1-201ENST00000274901 DDX21Q9NR30 783 aaKnown RBP eCLIP10.27□□□□□ -0.77
HMGCLL1-201ENST00000274901 LMO7Q8WWI1 1683 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 LRRC10BA6NIK2 292 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 WNT7AO00755 349 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 SEMA3EO15041 775 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 CYP27B1O15528 508 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 CXCR5P32302 372 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 BYSLQ13895 437 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 PLCB4Q15147 1175 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 RABL6Q3YEC7 729 aaPredicted RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 SPATS2Q86XZ4 545 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 CCDC114Q96M63 670 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 BLZF1Q9H2G9 400 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 VPS54Q9P1Q0 977 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 MYH10P35580 1976 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 ESYT3A0FGR9 886 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 HSF2BPO75031 334 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 MAP2K1Q02750 393 aaPredicted RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 TTF1Q15361 905 aaPredicted RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 ALS2CLQ60I27 953 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 RALYLQ86SE5 291 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 DIS3L2Q8IYB7 885 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 SPATA4Q8NEY3 305 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 ZNF483Q8TF39 744 aaPredicted RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 CYFIP2Q96F07 1278 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 CCDC43Q96MW1 224 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 DNAJC7Q99615 494 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 SLC26A6Q9BXS9 759 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 ANGEL1Q9UNK9 670 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 SRPRBQ9Y5M8 271 aaKnown RBP10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 CAPN6Q9Y6Q1 641 aa10.26□□□□□ -0.77
HMGCLL1-201ENST00000274901 TMCO5BA8MYB1 307 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 KCNJ18B7U540 433 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 E7EVH7 732 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 ATP5J2-PTCD1G3V325 749 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 ZNF263O14978 683 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 PTCD1O75127 700 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 DDX58O95786 925 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 IFIT1P09914 478 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 NR1D1P20393 614 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 IARSP41252 1262 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 KLK7P49862 253 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 EPHB4P54760 987 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 UBXN1Q04323 297 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 KCNJ12Q14500 433 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 NAA25Q14CX7 972 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 TRADDQ15628 312 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 WASHC4Q2M389 1173 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 TCP11X2Q5H9J9 407 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 NFRKBQ6P4R8 1299 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 COPS6Q7L5N1 327 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 KIAA1328Q86T90 577 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 IRF2BP1Q8IU81 584 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 IQCKQ8N0W5 287 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 CAVIN3Q969G5 261 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 SHISA4Q96DD7 197 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 PURBQ96QR8 312 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 MAPK8IP1Q9UQF2 711 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 WDR17Q8IZU2 1322 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 CAMTA1Q9Y6Y1 1673 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 RASSF10A6NK89 507 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 ATP2C2O75185 946 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 FAM107AO95990 144 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 MMP1P03956 469 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 MDH1P40925 334 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 CARSP49589 748 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 EVA1CP58658 441 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 SCARF1Q14162 830 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 KCTD19Q17RG1 926 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 LRRC24Q50LG9 513 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 ANKRD20A8PQ5CZ79 823 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 TMED8Q6PL24 325 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 LMBR1LQ6UX01 489 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 MICALCLQ6ZW33 695 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 IFNL2Q8IZJ0 200 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 CMTR1Q8N1G2 835 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 OR8K1Q8NGG5 319 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 RUFY1Q96T51 708 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 METTL22Q9BUU2 404 aaPredicted RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 MLXIPQ9HAP2 919 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 ATP6V0A4Q9HBG4 840 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 PPANQ9NQ55 473 aaKnown RBP10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 AGPAT5Q9NUQ2 364 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 SNX12Q9UMY4 172 aa10.25□□□□□ -0.77
HMGCLL1-201ENST00000274901 C5P01031 1676 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 XDHP47989 1333 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 KIF3CO14782 793 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 NCK2O43639 380 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 GLI1P08151 1106 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 ERCC3P19447 782 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 CDC25CP30307 473 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 ITGB3BPQ13352 177 aaPredicted RBP10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 TRIM29Q14134 588 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 EARS2Q5JPH6 523 aaKnown RBP10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 CHADLQ6NUI6 762 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 EMBQ6PCB8 327 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 PI16Q6UXB8 463 aa10.24□□□□□ -0.77
HMGCLL1-201ENST00000274901 KRT26Q7Z3Y9 468 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms