RNA–Protein interactions for RNA: ENST00000265598.7

LAMP3-201, Transcript of lysosomal associated membrane protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LAMP3, Length 3,375 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3-201ENST00000265598 PCDHA6Q9UN73 950 aa12.55□□□□□ -0.4
LAMP3-201ENST00000265598 PCDHA8Q9Y5H6 950 aa12.55□□□□□ -0.4
LAMP3-201ENST00000265598 SLC1A4P43007 532 aa12.54□□□□□ -0.4
LAMP3-201ENST00000265598 ARID5BQ14865 1188 aa12.54□□□□□ -0.4
LAMP3-201ENST00000265598 CCDC93Q567U6 631 aa12.54□□□□□ -0.4
LAMP3-201ENST00000265598 ANKS1AQ92625 1134 aa12.54□□□□□ -0.4
LAMP3-201ENST00000265598 NUP88Q99567 741 aaPredicted RBP12.54□□□□□ -0.4
LAMP3-201ENST00000265598 KARSQ15046 597 aaKnown RBP12.54□□□□□ -0.4
LAMP3-201ENST00000265598 CCDC12Q8WUD4 166 aaPredicted RBP12.54□□□□□ -0.4
LAMP3-201ENST00000265598 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
LAMP3-201ENST00000265598 PI4KBQ9UBF8 816 aa12.54□□□□□ -0.4
LAMP3-201ENST00000265598 FAM198AQ9UFP1 575 aa12.54□□□□□ -0.4
LAMP3-201ENST00000265598 MYH1P12882 1939 aa12.54□□□□□ -0.4
LAMP3-201ENST00000265598 PSMD14O00487 310 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 IGSF3O75054 1194 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 EEF2P13639 858 aaKnown RBP12.53□□□□□ -0.4
LAMP3-201ENST00000265598 GABPAQ06546 454 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 TNFRSF25Q93038 417 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 FERMT2Q96AC1 680 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 LZTS2Q9BRK4 669 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 SWAP70Q9UH65 585 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 PYCARDQ9ULZ3 195 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 MAPK8IP1Q9UQF2 711 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 SMTNL1A8MU46 457 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 BMP15O95972 392 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 GNA11P29992 359 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 TXLNAP40222 546 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 DLGAP5Q15398 846 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 UBE2SQ16763 222 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 DTHD1Q6ZMT9 781 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 MIGA2Q7L4E1 593 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 TMEM60Q9H2L4 133 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 NAV1Q8NEY1 1877 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 UBA7P41226 1012 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 ICA1Q05084 483 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 CCDC144BQ3MJ40 725 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 TMC6Q7Z403 805 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
LAMP3-201ENST00000265598 XPO4Q9C0E2 1151 aaKnown RBP12.53□□□□□ -0.4
LAMP3-201ENST00000265598 DNAJC18Q9H819 358 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 KIAA1551Q9HCM1 1747 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 ECM29Q5VYK3 1845 aa12.53□□□□□ -0.4
LAMP3-201ENST00000265598 GH2P01242 217 aa12.52□□□□□ -0.4
LAMP3-201ENST00000265598 ATP2C1P98194 919 aaPredicted RBP12.52□□□□□ -0.4
LAMP3-201ENST00000265598 NONOQ15233 471 aaKnown RBP eCLIP12.52□□□□□ -0.4
LAMP3-201ENST00000265598 MAST2Q6P0Q8 1798 aa12.52□□□□□ -0.4
LAMP3-201ENST00000265598 RGS22Q8NE09 1264 aa12.52□□□□□ -0.4
LAMP3-201ENST00000265598 TBCKQ8TEA7 893 aa12.52□□□□□ -0.4
LAMP3-201ENST00000265598 FANCLQ9NW38 375 aa12.52□□□□□ -0.4
LAMP3-201ENST00000265598 SH3BP5LQ7L8J4 393 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 ADGRF4Q8IZF3 695 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 SPZ1Q9BXG8 430 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 STAT6P42226 847 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 TXKP42681 527 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 ABCB5Q2M3G0 1257 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 USH1GQ495M9 461 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 SLFN13Q68D06 897 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 PLA2G4DQ86XP0 818 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 KCNF1Q9H3M0 494 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 BCS1LQ9Y276 419 aa12.52□□□□□ -0.41
LAMP3-201ENST00000265598 TAL1P17542 331 aaPredicted RBP12.51□□□□□ -0.41
LAMP3-201ENST00000265598 MYL5Q02045 173 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 TPD52L1Q16890 204 aaPredicted RBP12.51□□□□□ -0.41
LAMP3-201ENST00000265598 CC2D2BQ6DHV5 1058 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 NIM1KQ8IY84 436 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.51□□□□□ -0.41
LAMP3-201ENST00000265598 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
LAMP3-201ENST00000265598 LAMB1P07942 1786 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 TECP42680 631 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 ADCY7P51828 1080 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 NOLC1Q14978 699 aaKnown RBP eCLIP12.51□□□□□ -0.41
LAMP3-201ENST00000265598 IL17AQ16552 155 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 ASPRV1Q53RT3 343 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 IQUBQ8NA54 791 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
LAMP3-201ENST00000265598 DHX36Q9H2U1 1008 aaKnown RBP12.51□□□□□ -0.41
LAMP3-201ENST00000265598 SH3GLB2Q9NR46 395 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 HDAC9Q9UKV0 1011 aa12.51□□□□□ -0.41
LAMP3-201ENST00000265598 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
LAMP3-201ENST00000265598 ACTN4O43707 911 aaKnown RBP12.5□□□□□ -0.41
LAMP3-201ENST00000265598 ZNF543Q08ER8 600 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 RTKN2Q8IZC4 609 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 PAGE5Q96GU1 130 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 TUBE1Q9UJT0 475 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 SERPINA10Q9UK55 444 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 BMP6P22004 513 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 UBASH3AP57075 661 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 FANCCQ00597 558 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 CCDC84Q86UT8 332 aaPredicted RBP12.5□□□□□ -0.41
LAMP3-201ENST00000265598 JMJD4Q9H9V9 463 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 NFE2L3Q9Y4A8 694 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 SLFN14P0C7P3 912 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 CDAN1Q8IWY9 1227 aa12.5□□□□□ -0.41
LAMP3-201ENST00000265598 CACTINQ8WUQ7 758 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms