RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 CDK5RAP3Q96JB5 506 aa15.25■□□□□ 0.03
TNFRSF8-201ENST00000263932 SLC1A4P43007 532 aa15.25■□□□□ 0.03
TNFRSF8-201ENST00000263932 DTHD1Q6ZMT9 781 aa15.25■□□□□ 0.03
TNFRSF8-201ENST00000263932 SHISA4Q96DD7 197 aa15.25■□□□□ 0.03
TNFRSF8-201ENST00000263932 TECP42680 631 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 DNA2P51530 1060 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 RAD51AP2Q09MP3 1159 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 PFKFB3Q16875 520 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 SBK1Q52WX2 424 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 RESP18Q5W5W9 173 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 PHF20Q9BVI0 1012 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 NFE2L3Q9Y4A8 694 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 STK36Q9NRP7 1315 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 NRAPQ86VF7 1730 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 PTPREP23469 700 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 FBXO2Q9UK22 296 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 GJA3Q9Y6H8 435 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 FAM205AQ6ZU69 1335 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 TMEM232C9JQI7 657 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 RHBDL3P58872 404 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 FANCCQ00597 558 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 SLC15A2Q16348 729 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 CERKLQ49MI3 558 aaPredicted RBP15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 FLAD1Q8NFF5 587 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 C6orf50Q9HD87 102 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 LAMA4Q16363 1823 aa15.24■□□□□ 0.03
TNFRSF8-201ENST00000263932 CYTH3O43739 400 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 IL1R1P14778 569 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 CCT6AP40227 531 aaKnown RBP15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 IQCB1Q15051 598 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 PPP2R5BQ15173 497 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 DHX40Q8IX18 779 aaKnown RBP15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 CCDC148Q8NFR7 591 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 SEPT2Q15019 361 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 CCDC178Q5BJE1 867 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 FCHSD1Q86WN1 690 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 FOXP4Q8IVH2 680 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 UBXN4Q92575 508 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 ANKRD36CQ5JPF3 1778 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 MYL5Q02045 173 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 DPF2Q92785 391 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 CSRNP1Q96S65 589 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 PUF60Q9UHX1 559 aaKnown RBP15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 MAD2L2Q9UI95 211 aa15.23■□□□□ 0.03
TNFRSF8-201ENST00000263932 PCP11498 1178 aaKnown RBP15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 MTERF4Q7Z6M4 381 aaKnown RBP15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 CNKSR1Q969H4 720 aa15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 HOXA10P31260 410 aaPredicted RBP15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 PRKG1Q13976 671 aa15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 ARHGAP29Q52LW3 1261 aa15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 SRPRBQ9Y5M8 271 aaKnown RBP15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 NWD2Q9ULI1 1742 aa15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 ENOX2Q16206 610 aaKnown RBP15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 TCP11L1Q9NUJ3 509 aa15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 MAN1B1Q9UKM7 699 aa15.22■□□□□ 0.03
TNFRSF8-201ENST00000263932 DDTLA6NHG4 134 aaPredicted RBP15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 USP17L10C9JJH3 530 aa15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 PPP4CP60510 307 aa15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 REXO1Q8N1G1 1221 aaKnown RBP15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 TBCKQ8TEA7 893 aa15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 SAMSN1Q9NSI8 373 aaKnown RBP15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 PCDHA4Q9UN74 947 aa15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 CTNND2Q9UQB3 1225 aa15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 BAG6P46379 1132 aa15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 NEDD1Q8NHV4 660 aa15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 CARD6Q9BX69 1037 aa15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 TMEM60Q9H2L4 133 aa15.21■□□□□ 0.03
TNFRSF8-201ENST00000263932 DYMQ7RTS9 669 aa15.21■□□□□ 0.02
TNFRSF8-201ENST00000263932 IQUBQ8NA54 791 aa15.21■□□□□ 0.02
TNFRSF8-201ENST00000263932 LRRN4CLQ8ND94 238 aa15.21■□□□□ 0.02
TNFRSF8-201ENST00000263932 FEZ1Q99689 392 aa15.21■□□□□ 0.02
TNFRSF8-201ENST00000263932 MYH7P12883 1935 aa15.21■□□□□ 0.02
TNFRSF8-201ENST00000263932 A0A087X0B3 334 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 GH2P01242 217 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 GRM4Q14833 912 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 NONOQ15233 471 aaKnown RBP eCLIP15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 C16orf86Q6ZW13 317 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 POLD4Q9HCU8 107 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L15C9J2P7 530 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L13C9JLJ4 530 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L11C9JVI0 530 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L18D6R9N7 530 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L22D6RA61 530 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L17D6RBQ6 530 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L19D6RCP7 530 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L20D6RJB6 530 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 PHACTR2O75167 634 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 GTF2F1P35269 517 aaKnown RBP eCLIP15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 UBXN2AP68543 259 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 ICA1Q05084 483 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L24Q0WX57 530 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 FUT2Q10981 343 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 DLGAP5Q15398 846 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 USP17L6PQ6QN14 398 aa15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 PRMT6Q96LA8 375 aaPredicted RBP15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 SEC31AO94979 1220 aaKnown RBP15.2■□□□□ 0.02
TNFRSF8-201ENST00000263932 TTLL1O95922 423 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms