RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 DMP1Q13316 513 aaPredicted RBP12.46□□□□□ -0.42
PTPN4-201ENST00000263708 C1orf228Q6PIY5 440 aa12.46□□□□□ -0.42
PTPN4-201ENST00000263708 N4BP2L2Q92802 583 aaPredicted RBP12.46□□□□□ -0.42
PTPN4-201ENST00000263708 TTC1Q99614 292 aa12.46□□□□□ -0.42
PTPN4-201ENST00000263708 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.46□□□□□ -0.42
PTPN4-201ENST00000263708 V9GY48 417 aaPredicted RBP12.46□□□□□ -0.42
PTPN4-201ENST00000263708 ARHGAP6O43182 974 aa12.46□□□□□ -0.42
PTPN4-201ENST00000263708 CDKL2Q92772 493 aa12.46□□□□□ -0.42
PTPN4-201ENST00000263708 HESX1Q9UBX0 185 aa12.46□□□□□ -0.42
PTPN4-201ENST00000263708 TRPA1O75762 1119 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 RSRC2Q7L4I2 434 aaKnown RBP12.45□□□□□ -0.42
PTPN4-201ENST00000263708 FBXL13Q8NEE6 735 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 GDAP1Q8TB36 358 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 PIP4K2CQ8TBX8 421 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 SGK1O00141 431 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 CASKIN1Q8WXD9 1431 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 MAST3O60307 1309 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 KCNK3O14649 394 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 EEF1GP26641 437 aaKnown RBP12.45□□□□□ -0.42
PTPN4-201ENST00000263708 GPR162Q16538 588 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 DPP8Q6V1X1 898 aaPredicted RBP12.45□□□□□ -0.42
PTPN4-201ENST00000263708 NUDCD3Q8IVD9 361 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 SUGCTQ9HAC7 445 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 C1orf112Q9NSG2 853 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 PTPREP23469 700 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 MAP3K7CLP57077 242 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 ELF2Q15723 593 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 ABTB1Q969K4 478 aaPredicted RBP12.45□□□□□ -0.42
PTPN4-201ENST00000263708 CARD6Q9BX69 1037 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 CPSF3Q9UKF6 684 aaKnown RBP12.45□□□□□ -0.42
PTPN4-201ENST00000263708 CLTAP09496 248 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 ATF2P15336 505 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 TMEM259Q4ZIN3 620 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 NFATC2IPQ8NCF5 419 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 LZICQ8WZA0 190 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 TMED1Q13445 227 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 RASIP1Q5U651 963 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.45□□□□□ -0.42
PTPN4-201ENST00000263708 K7ENM7 598 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 TLR3O15455 904 aaKnown RBP12.45□□□□□ -0.42
PTPN4-201ENST00000263708 HLA-DPA1P20036 260 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 ERO1AQ96HE7 468 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 MTRQ99707 1265 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 BLZF1Q9H2G9 400 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 CAPN7Q9Y6W3 813 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 KIF14Q15058 1648 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 KSR2Q6VAB6 950 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 LRWD1Q9UFC0 647 aa12.45□□□□□ -0.42
PTPN4-201ENST00000263708 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 SLF1Q9BQI6 1058 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 NLRC4Q9NPP4 1024 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 TYW1Q9NV66 732 aaKnown RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 MAGEA1P43355 309 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 YWHAGP61981 247 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 LRRC8CQ8TDW0 803 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 MMTAG2Q9BU76 263 aaKnown RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 MOSPD1Q9UJG1 213 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 ATP1A2P50993 1020 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 SNX1Q13596 522 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 XRCC5P13010 732 aaKnown RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 HIBADHP31937 336 aaKnown RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 PLEKHG3A1L390 1219 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 ZRANB2O95218 330 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 MYCP01106 439 aaPredicted RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 SH3BGRP55822 239 aaPredicted RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 CCDC184Q52MB2 194 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 KIAA1841Q6NSI8 718 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 BBS5Q8N3I7 341 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.44□□□□□ -0.423e-6■■■■■ 33.3
PTPN4-201ENST00000263708 PDE1BQ01064 536 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 CDV3Q9UKY7 258 aaKnown RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 TROQ12816 1431 aaPredicted RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 INHBAP08476 426 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 IL2RBP14784 551 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 POLGP54098 1239 aaPredicted RBP12.44□□□□□ -0.42
PTPN4-201ENST00000263708 ARPP19P56211 112 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 FANCCQ00597 558 aa12.44□□□□□ -0.42
PTPN4-201ENST00000263708 OAS2P29728 719 aaKnown RBP12.43□□□□□ -0.42
PTPN4-201ENST00000263708 MAP2K2P36507 400 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 GNPTABQ3T906 1256 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 HABP4Q5JVS0 413 aaKnown RBP12.43□□□□□ -0.42
PTPN4-201ENST00000263708 ANO1Q5XXA6 986 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 RFX6Q8HWS3 928 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 AK9Q5TCS8 1911 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 BNIP3LO60238 219 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 KRT10P13645 584 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 NFKBIL1Q9UBC1 381 aaPredicted RBP12.43□□□□□ -0.42
PTPN4-201ENST00000263708 ESRRGP62508 458 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 TMTC3Q6ZXV5 915 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 NCAPG2Q86XI2 1143 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 GCNAQ96QF7 691 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 POC1B-GALNT4F8VUJ3 575 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 BFSP1Q12934 665 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 CABP7Q86V35 215 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 H7C1D1 291 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 SOX5P35711 763 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 STAT1P42224 750 aa12.43□□□□□ -0.42
PTPN4-201ENST00000263708 POSTNQ15063 836 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms