RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 A0A1B0GTH6 734 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 CTAGE9A4FU28 777 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 BMP6P22004 513 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 ERCC5P28715 1186 aaPredicted RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 SARSP49591 514 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 PPP4CP60510 307 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 CASP8Q14790 479 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 WDR93Q6P2C0 686 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 LRRC31Q6UY01 552 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 SMIM5Q71RC9 77 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 SLF2Q8IX21 1173 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 EFCAB13Q8IY85 973 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 CCDC51Q96ER9 411 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 ZNF287Q9HBT7 754 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 MAN1B1Q9UKM7 699 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 TTF2Q9UNY4 1162 aaKnown RBP12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 JRKLQ9Y4A0 524 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 ROBO3Q96MS0 1386 aa12.19□□□□□ -0.46
CHRNA1-201ENST00000261007 WTIPA6NIX2 430 aaPredicted RBP12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 PPFIA4O75335 1185 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 PLCG2P16885 1265 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 FECHP22830 423 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 KIF5BP33176 963 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 AARSP49588 968 aaKnown RBP eCLIP12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 MORC3Q14149 939 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 SUGP1Q8IWZ8 645 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 DESI2Q9BSY9 194 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 CTAGE15A4D2H0 777 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 BTBD18B2RXH4 712 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 CTAGE8P0CG41 777 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 GYS1P13807 737 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 MCM3P25205 808 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 KRT2P35908 639 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 TROAPQ12815 778 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 FAM182BQ5T319 152 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 KANK3Q6NY19 840 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 TMTC3Q6ZXV5 915 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 CTAGE6Q86UF2 777 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 PPFIBP1Q86W92 1011 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 DGKHQ86XP1 1220 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 CTAGE4Q8IX94 777 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 TBC1D22AQ8WUA7 517 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 CRAMP1Q96RY5 1269 aa12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 PUF60Q9UHX1 559 aaKnown RBP12.18□□□□□ -0.46
CHRNA1-201ENST00000261007 TSPY2A6NKD2 308 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 SERPINB2P05120 415 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 PTPREP23469 700 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 HOXA10P31260 410 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 GNAQP50148 359 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 POSTNQ15063 836 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 KIF4BQ2VIQ3 1234 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 RAD9BQ6WBX8 426 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 PACS2Q86VP3 889 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 STK11IPQ8N1F8 1099 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 ANKS1AQ92625 1134 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 PHF20Q9BVI0 1012 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 LRRC4BQ9NT99 713 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 MCM9Q9NXL9 1143 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 GGA1Q9UJY5 639 aa12.17□□□□□ -0.46
CHRNA1-201ENST00000261007 SOWAHDA6NJG2 315 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 N4BP1O75113 896 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 IL1R1P14778 569 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 ATP2B1P20020 1258 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 GUCY1A2P33402 732 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 PBX1P40424 430 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 PLCD1P51178 756 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 FMR1Q06787 632 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 FUT2Q10981 343 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 ZNF569Q5MCW4 686 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 TXNRD3Q86VQ6 643 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 CCDC24Q8N4L8 307 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 CTAGE1Q96RT6 745 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 NAPGQ99747 312 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 IRX2Q9BZI1 471 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 ZSWIM4Q9H7M6 989 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 LZTFL1Q9NQ48 299 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 TCP11L1Q9NUJ3 509 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 A0A087WUV0 522 aaPredicted RBP12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 CYP2D7A0A087X1C5 515 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 VSNL1P62760 191 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 MTF1Q14872 753 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 PTPN21Q16825 1174 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 CCDC102AQ96A19 550 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 KCNJ14Q9UNX9 436 aa12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 SRPRBQ9Y5M8 271 aaKnown RBP12.16□□□□□ -0.46
CHRNA1-201ENST00000261007 NAV1Q8NEY1 1877 aa12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 ITIH6Q6UXX5 1313 aa12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 KLRG2A4D1S0 409 aaPredicted RBP12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 TRIM75PA6NK02 468 aa12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 UFL1O94874 794 aa12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 TRAPPC10P48553 1259 aa12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 PKN1Q16512 942 aa12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 MAP9Q49MG5 647 aa12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 DNAJC21Q5F1R6 531 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 SWT1Q5T5J6 900 aaKnown RBP12.15□□□□□ -0.46
CHRNA1-201ENST00000261007 FOXR1Q6PIV2 292 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms