RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 PFKFB3Q16875 520 aaPredicted RBP20.23■□□□□ 0.83
SSB-201ENST00000260956 SPDYE2Q495Y8 402 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 TRIM5Q9C035 493 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 HSD3B7Q9H2F3 369 aa20.23■□□□□ 0.83
SSB-201ENST00000260956 BAZ2BQ9UIF8 2168 aaKnown RBP20.23■□□□□ 0.83
SSB-201ENST00000260956 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.22■□□□□ 0.83
SSB-201ENST00000260956 TSPY2A6NKD2 308 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 NOVP48745 357 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 LONRF3Q496Y0 759 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 NOM1Q5C9Z4 860 aaKnown RBP20.22■□□□□ 0.83
SSB-201ENST00000260956 FOXP4Q8IVH2 680 aaPredicted RBP20.22■□□□□ 0.83
SSB-201ENST00000260956 CDAN1Q8IWY9 1227 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 SLC44A5Q8NCS7 719 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 CTCFLQ8NI51 663 aaPredicted RBP20.22■□□□□ 0.83
SSB-201ENST00000260956 TGFBRAP1Q8WUH2 860 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 FLT1P17948 1338 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 PITPNM2Q9BZ72 1349 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 GREB1LQ9C091 1923 aaPredicted RBP20.22■□□□□ 0.83
SSB-201ENST00000260956 ADAMTS3O15072 1205 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 SCG2P13521 617 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 HSPA6P17066 643 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 CCDC144BQ3MJ40 725 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 CDC42EP5Q6NZY7 148 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 C16orf86Q6ZW13 317 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 SULF1Q8IWU6 871 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 CABP5Q9NP86 173 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 NRBP1Q9UHY1 535 aa20.22■□□□□ 0.83
SSB-201ENST00000260956 GOLGA6L6A8MZA4 724 aa20.21■□□□□ 0.83
SSB-201ENST00000260956 GOLGA6L19H0YKK7 550 aa20.21■□□□□ 0.83
SSB-201ENST00000260956 AKAP17AQ02040 695 aaKnown RBP20.21■□□□□ 0.83
SSB-201ENST00000260956 NAT10Q9H0A0 1025 aaKnown RBP20.21■□□□□ 0.83
SSB-201ENST00000260956 VEZTQ9HBM0 779 aa20.21■□□□□ 0.83
SSB-201ENST00000260956 TAOK2Q9UL54 1235 aa20.21■□□□□ 0.83
SSB-201ENST00000260956 PLIN4Q96Q06 1357 aa20.2■□□□□ 0.83
SSB-201ENST00000260956 ACTN4O43707 911 aaKnown RBP20.2■□□□□ 0.82
SSB-201ENST00000260956 XBP1P17861 261 aa20.2■□□□□ 0.82
SSB-201ENST00000260956 APLP1P51693 650 aa20.2■□□□□ 0.82
SSB-201ENST00000260956 PNOCQ13519 176 aa20.2■□□□□ 0.82
SSB-201ENST00000260956 NT5DC1Q5TFE4 455 aa20.2■□□□□ 0.82
SSB-201ENST00000260956 MAPKAPK5Q8IW41 473 aa20.2■□□□□ 0.82
SSB-201ENST00000260956 C17orf53Q8N3J3 647 aaPredicted RBP20.2■□□□□ 0.82
SSB-201ENST00000260956 DEFB129Q9H1M3 183 aa20.2■□□□□ 0.82
SSB-201ENST00000260956 MAD2L2Q9UI95 211 aa20.2■□□□□ 0.82
SSB-201ENST00000260956 TRIM75PA6NK02 468 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 TCP10L2B9ZVM9 353 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 IKBKBO14920 756 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 NFIAQ12857 509 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 NOLC1Q14978 699 aaKnown RBP eCLIP20.19■□□□□ 0.821e-7■■■■■ 40.2
SSB-201ENST00000260956 SLC4A8Q2Y0W8 1093 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 CCDC178Q5BJE1 867 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 CCDC186Q7Z3E2 898 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 PNMA1Q8ND90 353 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 CDCA5Q96FF9 252 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 M0R2N6 131 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 MYO1BO43795 1136 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 PLCG2P16885 1265 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 BMP6P22004 513 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 USP49Q70CQ1 688 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 NAP1L5Q96NT1 182 aaPredicted RBP20.19■□□□□ 0.82
SSB-201ENST00000260956 ZNF408Q9H9D4 720 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 CEP131Q9UPN4 1083 aa20.19■□□□□ 0.82
SSB-201ENST00000260956 CNTNAP1P78357 1384 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 BIN1O00499 593 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 FOXN1O15353 648 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 CELF2O95319 508 aaKnown RBP20.18■□□□□ 0.82
SSB-201ENST00000260956 KIF5BP33176 963 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 SARSP49591 514 aaKnown RBP20.18■□□□□ 0.82
SSB-201ENST00000260956 RASA3Q14644 834 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 SPECC1Q5M775 1068 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 TEX11Q8IYF3 940 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 STAG2Q8N3U4 1231 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 SPATA20Q8TB22 786 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 KAT14Q9H8E8 782 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 USP40Q9NVE5 1235 aa20.18■□□□□ 0.82
SSB-201ENST00000260956 SIPA1L1O43166 1804 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 PALM3A6NDB9 673 aaPredicted RBP20.17■□□□□ 0.82
SSB-201ENST00000260956 BECN2A8MW95 431 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 CDK8P49336 464 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 ZFPM1Q8IX07 1006 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 NEDD1Q8NHV4 660 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 TEPSINQ96N21 525 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 NOL10Q9BSC4 688 aaKnown RBP20.17■□□□□ 0.82
SSB-201ENST00000260956 TMEM39BQ9GZU3 492 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 CSRNP2Q9H175 543 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 SH3GLB2Q9NR46 395 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 CLIP2Q9UDT6 1046 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 SAP30BPQ9UHR5 308 aaKnown RBP20.17■□□□□ 0.82
SSB-201ENST00000260956 FZD1Q9UP38 647 aa20.17■□□□□ 0.82
SSB-201ENST00000260956 A0A087X0B3 334 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 CYTH3O43739 400 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 BMP15O95972 392 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 ATP2C1P98194 919 aaPredicted RBP20.16■□□□□ 0.82
SSB-201ENST00000260956 LRMPQ12912 555 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 TYW1BQ6NUM6 668 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 APOBEC3FQ8IUX4 373 aaKnown RBP20.16■□□□□ 0.82
SSB-201ENST00000260956 TMEM47Q9BQJ4 181 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 FAM198AQ9UFP1 575 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 PCDHA5Q9Y5H7 936 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 TRAPPC10P48553 1259 aa20.16■□□□□ 0.82
SSB-201ENST00000260956 GABPAQ06546 454 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms