RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 LETM2Q2VYF4 491 aa14.91□□□□□ -0.02
THSD1-201ENST00000258613 RBM5P52756 815 aaKnown RBP eCLIP14.9□□□□□ -0.02
THSD1-201ENST00000258613 E4F1Q66K89 784 aaPredicted RBP14.9□□□□□ -0.02
THSD1-201ENST00000258613 CDC42EP5Q6NZY7 148 aa14.9□□□□□ -0.02
THSD1-201ENST00000258613 NLGN1Q8N2Q7 840 aa14.9□□□□□ -0.02
THSD1-201ENST00000258613 PLCD3Q8N3E9 789 aa14.9□□□□□ -0.02
THSD1-201ENST00000258613 ANKS1AQ92625 1134 aa14.9□□□□□ -0.02
THSD1-201ENST00000258613 GJA10Q969M2 543 aa14.9□□□□□ -0.02
THSD1-201ENST00000258613 SFPQP23246 707 aaKnown RBP eCLIP14.9□□□□□ -0.02
THSD1-201ENST00000258613 ADKP55263 362 aaKnown RBP14.9□□□□□ -0.02
THSD1-201ENST00000258613 FERMT2Q96AC1 680 aa14.9□□□□□ -0.02
THSD1-201ENST00000258613 OSBPL5Q9H0X9 879 aaPredicted RBP14.9□□□□□ -0.02
THSD1-201ENST00000258613 BARHL2Q9NY43 387 aa14.9□□□□□ -0.02
THSD1-201ENST00000258613 SMCO2A6NFE2 343 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 M0R2N6 131 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 TEX33O43247 280 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 DHX8Q14562 1220 aaKnown RBP14.89□□□□□ -0.03
THSD1-201ENST00000258613 E2F4Q16254 413 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 NT5DC1Q5TFE4 455 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 RASSF8Q8NHQ8 419 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 TBC1D22AQ8WUA7 517 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 COA1Q9GZY4 146 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 TCP11L1Q9NUJ3 509 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 HOOK1Q9UJC3 728 aaKnown RBP14.89□□□□□ -0.03
THSD1-201ENST00000258613 GDAQ9Y2T3 454 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 PARP3Q9Y6F1 533 aa14.89□□□□□ -0.03
THSD1-201ENST00000258613 NPR1P16066 1061 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 APOBEC3HQ6NTF7 200 aaKnown RBP14.88□□□□□ -0.03
THSD1-201ENST00000258613 KCTD1Q719H9 257 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 SH3RF1Q7Z6J0 888 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 SPATA20Q8TB22 786 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 CPLX3Q8WVH0 158 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 FAM163AQ96GL9 167 aaPredicted RBP14.88□□□□□ -0.03
THSD1-201ENST00000258613 TMX1Q9H3N1 280 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 PDHBP11177 359 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 CCAR2Q8N163 923 aaKnown RBP14.88□□□□□ -0.03
THSD1-201ENST00000258613 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.88□□□□□ -0.03
THSD1-201ENST00000258613 V9GYY5 206 aaPredicted RBP14.88□□□□□ -0.03
THSD1-201ENST00000258613 CCNT1O60563 726 aaKnown RBP14.88□□□□□ -0.03
THSD1-201ENST00000258613 PLCG2P16885 1265 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 TAL1P17542 331 aaPredicted RBP14.88□□□□□ -0.03
THSD1-201ENST00000258613 CALML3P27482 149 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 PDXDC2PQ6P474 469 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 C2CD5Q86YS7 1000 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 ZNF710Q8N1W2 664 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 MTMR4Q9NYA4 1195 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 CTNND2Q9UQB3 1225 aa14.88□□□□□ -0.03
THSD1-201ENST00000258613 VGLL3A8MV65 326 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 TOP1P11387 765 aaKnown RBP14.87□□□□□ -0.03
THSD1-201ENST00000258613 SNAP25P60880 206 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 MLKLQ8NB16 471 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 PPP1R3GB7ZBB8 358 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 ZNF18P17022 549 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 TERF1P54274 439 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 NAALADL2Q58DX5 795 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 VSTM4Q8IW00 320 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 FAM177A1Q8N128 213 aaPredicted RBP14.87□□□□□ -0.03
THSD1-201ENST00000258613 SERPINB13Q9UIV8 391 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 SCN9AQ15858 1988 aa14.87□□□□□ -0.03
THSD1-201ENST00000258613 SHMT1P34896 483 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 RRAGBQ5VZM2 374 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 PRIMPOLQ96LW4 560 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 DDTLA6NHG4 134 aaPredicted RBP14.86□□□□□ -0.03
THSD1-201ENST00000258613 CCT6AP40227 531 aaKnown RBP14.86□□□□□ -0.03
THSD1-201ENST00000258613 GNAQP50148 359 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 GABPAQ06546 454 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 UBE2SQ16763 222 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 AOC3Q16853 763 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 CEP135Q66GS9 1140 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 ZSCAN29Q8IWY8 852 aaPredicted RBP14.86□□□□□ -0.03
THSD1-201ENST00000258613 IQUBQ8NA54 791 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 RRP36Q96EU6 259 aaKnown RBP14.86□□□□□ -0.03
THSD1-201ENST00000258613 DNAJC18Q9H819 358 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 ZNF287Q9HBT7 754 aa14.86□□□□□ -0.03
THSD1-201ENST00000258613 TRIM49BA6NDI0 452 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 STAT6P42226 847 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 TECP42680 631 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 CRKP46108 304 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 GSDMDP57764 484 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 PTPN14Q15678 1187 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 KANK3Q6NY19 840 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 DTHD1Q6ZMT9 781 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 SLF2Q8IX21 1173 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 TBCKQ8TEA7 893 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 LTBP1Q14766 1721 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 EN1Q05925 392 aaPredicted RBP14.85□□□□□ -0.03
THSD1-201ENST00000258613 ENOX1Q8TC92 643 aaKnown RBP14.85□□□□□ -0.03
THSD1-201ENST00000258613 HPS3Q969F9 1004 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 MASTLQ96GX5 879 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 SEC63Q9UGP8 760 aaKnown RBP14.85□□□□□ -0.03
THSD1-201ENST00000258613 SLX4Q8IY92 1834 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 DYNC1I1O14576 645 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 PPP1R11O60927 126 aaPredicted RBP14.85□□□□□ -0.03
THSD1-201ENST00000258613 ALDH1B1P30837 517 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 ZMYND12Q9H0C1 365 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 IMPACTQ9P2X3 320 aa14.85□□□□□ -0.03
THSD1-201ENST00000258613 SCAF8Q9UPN6 1271 aaKnown RBP14.85□□□□□ -0.03
THSD1-201ENST00000258613 COL11A2P13942 1736 aaPredicted RBP14.84□□□□□ -0.03
THSD1-201ENST00000258613 SYNRGQ9UMZ2 1314 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms