RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 C2CD5Q86YS7 1000 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 CCDC175P0C221 793 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 NPR1P16066 1061 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 ARL6IP4Q66PJ3 421 aaKnown RBP17.7■□□□□ 0.42
RFX1-201ENST00000254325 NEDD1Q8NHV4 660 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 CRAMP1Q96RY5 1269 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 CGNQ9P2M7 1197 aaKnown RBP17.7■□□□□ 0.42
RFX1-201ENST00000254325 TM4SF1P30408 202 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 MORC3Q14149 939 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 FKBP15Q5T1M5 1219 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 ARMCX5Q6P1M9 558 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 LRWD1Q9UFC0 647 aa17.7■□□□□ 0.42
RFX1-201ENST00000254325 USP17L5A8MUK1 530 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 ACTN4O43707 911 aaKnown RBP17.69■□□□□ 0.42
RFX1-201ENST00000254325 TUBB4AP04350 444 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 AMIGO3Q86WK7 504 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 PPP1R13BQ96KQ4 1090 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 EPS15P42566 896 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 CBX1P83916 185 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 CCZ1BP86790 482 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 CCZ1P86791 482 aaPredicted RBP17.69■□□□□ 0.42
RFX1-201ENST00000254325 FMR1Q06787 632 aaKnown RBP eCLIP17.69■□□□□ 0.42
RFX1-201ENST00000254325 CALCRLQ16602 461 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 SP8Q8IXZ3 490 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 COA7Q96BR5 231 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 LZTFL1Q9NQ48 299 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 POLLQ9UGP5 575 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 FOXP4Q8IVH2 680 aaPredicted RBP17.69■□□□□ 0.42
RFX1-201ENST00000254325 UIMC1Q96RL1 719 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 DAGLAQ9Y4D2 1042 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 SHANK3Q9BYB0 1731 aa17.69■□□□□ 0.42
RFX1-201ENST00000254325 GPR75-ASB3A0A0A6YYF3 556 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 SLC1A4P43007 532 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 BARHL2Q9NY43 387 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 PSDA5PKW4 1024 aaPredicted RBP17.68■□□□□ 0.42
RFX1-201ENST00000254325 IGSF3O75054 1194 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 CUL4BQ13620 913 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 NCAPHQ15003 741 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 KIF4BQ2VIQ3 1234 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 SV2BQ7L1I2 683 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 CNGA4Q8IV77 575 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 FAM114A1Q8IWE2 563 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 TBCKQ8TEA7 893 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 FLAD1Q8NFF5 587 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 RTFDC1Q9BY42 306 aaPredicted RBP17.68■□□□□ 0.42
RFX1-201ENST00000254325 BCL9LQ86UU0 1499 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 IL17RBQ9NRM6 502 aa17.68■□□□□ 0.42
RFX1-201ENST00000254325 CTDP1Q9Y5B0 961 aaPredicted RBP17.68■□□□□ 0.42
RFX1-201ENST00000254325 SPDYE4A6NLX3 237 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 TTLL1O95922 423 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 TRIM21P19474 475 aaKnown RBP17.67■□□□□ 0.42
RFX1-201ENST00000254325 ASPRV1Q53RT3 343 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 KIAA1328Q86T90 577 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 CERKQ8TCT0 537 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 TSG101Q99816 390 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 COL1A1P02452 1464 aaPredicted RBP17.67■□□□□ 0.42
RFX1-201ENST00000254325 PP2D1A8MPX8 630 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 TEX35Q5T0J7 233 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 DESI2Q9BSY9 194 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 DEF6Q9H4E7 631 aa17.67■□□□□ 0.42
RFX1-201ENST00000254325 MYH7P12883 1935 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 SLC16A2P36021 539 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 CSGALNACT2Q8N6G5 542 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
RFX1-201ENST00000254325 CACNB3P54284 484 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 C16orf86Q6ZW13 317 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 SLC51AQ86UW1 340 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 ZNF397Q8NF99 534 aaPredicted RBP17.66■□□□□ 0.42
RFX1-201ENST00000254325 CUL5Q93034 780 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 MXD3Q9BW11 206 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 DISC1Q9NRI5 854 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 ZNF215Q9UL58 517 aaPredicted RBP17.66■□□□□ 0.42
RFX1-201ENST00000254325 LAMA4Q16363 1823 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 BICDL2A1A5D9 508 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 KCNJ18B7U540 433 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 LAD1O00515 517 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 SF3B2Q13435 895 aaKnown RBP17.66■□□□□ 0.42
RFX1-201ENST00000254325 KCNJ12Q14500 433 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 RCSD1Q6JBY9 416 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 SNX29Q8TEQ0 813 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 MAD2L2Q9UI95 211 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 PCDHA6Q9UN73 950 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 ATP6V0A2Q9Y487 856 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 PCDHA8Q9Y5H6 950 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 VEGFAP15692 232 aaPredicted RBP17.66■□□□□ 0.42
RFX1-201ENST00000254325 KCTD1Q719H9 257 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 DYMQ7RTS9 669 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 SRRTQ9BXP5 876 aaKnown RBP17.66■□□□□ 0.42
RFX1-201ENST00000254325 SWAP70Q9UH65 585 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 PPP2R2CQ9Y2T4 447 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 COL16A1Q07092 1604 aaPredicted RBP17.66■□□□□ 0.42
RFX1-201ENST00000254325 AKAP11Q9UKA4 1901 aa17.66■□□□□ 0.42
RFX1-201ENST00000254325 FGFR1OPO95684 399 aaKnown RBP17.65■□□□□ 0.42
RFX1-201ENST00000254325 ETF1P62495 437 aaKnown RBP17.65■□□□□ 0.42
RFX1-201ENST00000254325 EEF2KMTQ96G04 330 aa17.65■□□□□ 0.42
RFX1-201ENST00000254325 ERO1AQ96HE7 468 aa17.65■□□□□ 0.42
RFX1-201ENST00000254325 LRRC27Q9C0I9 530 aa17.65■□□□□ 0.42
RFX1-201ENST00000254325 ANKRD36CQ5JPF3 1778 aa17.65■□□□□ 0.42
RFX1-201ENST00000254325 FAM237AA0A1B0GTK4 181 aa17.65■□□□□ 0.42
RFX1-201ENST00000254325 AKR1B1P15121 316 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms