RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 LSG1Q9H089 658 aaKnown RBP29.52■■■□□ 2.32
LSM7-201ENST00000252622 SLC38A10Q9HBR0 1119 aa29.52■■■□□ 2.32
LSM7-201ENST00000252622 ISY1Q9ULR0 285 aaKnown RBP29.52■■■□□ 2.32
LSM7-201ENST00000252622 RBM8AQ9Y5S9 174 aaKnown RBP29.52■■■□□ 2.32
LSM7-201ENST00000252622 ATP2A1O14983 1001 aa29.51■■■□□ 2.31
LSM7-201ENST00000252622 ZBED4O75132 1171 aa29.51■■■□□ 2.31
LSM7-201ENST00000252622 MYCP01106 439 aaPredicted RBP29.51■■■□□ 2.31
LSM7-201ENST00000252622 FDX1P10109 184 aa29.51■■■□□ 2.31
LSM7-201ENST00000252622 ANKS1AQ92625 1134 aa29.51■■■□□ 2.31
LSM7-201ENST00000252622 ZKSCAN3Q9BRR0 538 aa29.51■■■□□ 2.31
LSM7-201ENST00000252622 TEX13BQ9BXU2 312 aa29.51■■■□□ 2.31
LSM7-201ENST00000252622 ZSWIM5Q9P217 1185 aa29.51■■■□□ 2.31
LSM7-201ENST00000252622 HOXC6P09630 235 aa29.5■■■□□ 2.31
LSM7-201ENST00000252622 TRDNQ13061 729 aa29.5■■■□□ 2.31
LSM7-201ENST00000252622 CASC1Q6TDU7 716 aa29.5■■■□□ 2.31
LSM7-201ENST00000252622 RASGRP2Q7LDG7 609 aa29.5■■■□□ 2.31
LSM7-201ENST00000252622 ABRAQ8N0Z2 381 aa29.5■■■□□ 2.31
LSM7-201ENST00000252622 TRIB2Q92519 343 aa29.5■■■□□ 2.31
LSM7-201ENST00000252622 ZSCAN10Q96SZ4 725 aaPredicted RBP29.5■■■□□ 2.31
LSM7-201ENST00000252622 CCL5P13501 91 aa29.49■■■□□ 2.31
LSM7-201ENST00000252622 ZKSCAN1P17029 563 aaPredicted RBP29.49■■■□□ 2.31
LSM7-201ENST00000252622 OAZ1P54368 228 aa29.49■■■□□ 2.31
LSM7-201ENST00000252622 KCTD1Q719H9 257 aa29.49■■■□□ 2.31
LSM7-201ENST00000252622 CTDP1Q9Y5B0 961 aaPredicted RBP29.49■■■□□ 2.31
LSM7-201ENST00000252622 IKQ13123 557 aaPredicted RBP29.48■■■□□ 2.31
LSM7-201ENST00000252622 CCDC96Q2M329 555 aa29.48■■■□□ 2.31
LSM7-201ENST00000252622 MTMR7Q9Y216 660 aa29.48■■■□□ 2.31
LSM7-201ENST00000252622 TNKSO95271 1327 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 KIAA0100Q14667 2235 aaKnown RBP29.47■■■□□ 2.31
LSM7-201ENST00000252622 SNHG28P0DPA3 235 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 PDHBP11177 359 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 ADORA2AP29274 412 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 SNRNP48Q6IEG0 339 aaKnown RBP29.47■■■□□ 2.31
LSM7-201ENST00000252622 ENAHQ8N8S7 591 aaPredicted RBP29.47■■■□□ 2.31
LSM7-201ENST00000252622 CHMP4CQ96CF2 233 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 UBAC1Q9BSL1 405 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 RNF208Q9H0X6 261 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 UNC93B1Q9H1C4 597 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 ANO2Q9NQ90 1003 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 TAF6LQ9Y6J9 622 aa29.47■■■□□ 2.31
LSM7-201ENST00000252622 E7EWF7 191 aa29.46■■■□□ 2.31
LSM7-201ENST00000252622 BTNL9Q6UXG8 535 aa29.46■■■□□ 2.31
LSM7-201ENST00000252622 GJB1P08034 283 aa29.45■■■□□ 2.31
LSM7-201ENST00000252622 FCER1AP12319 257 aa29.45■■■□□ 2.31
LSM7-201ENST00000252622 MLLT1Q03111 559 aaPredicted RBP29.45■■■□□ 2.31
LSM7-201ENST00000252622 CCL14Q16627 93 aa29.45■■■□□ 2.31
LSM7-201ENST00000252622 MAP3K21Q5TCX8 1036 aa29.45■■■□□ 2.31
LSM7-201ENST00000252622 RALYLQ86SE5 291 aaKnown RBP29.45■■■□□ 2.31
LSM7-201ENST00000252622 NCOA7Q8NI08 942 aa29.45■■■□□ 2.31
LSM7-201ENST00000252622 KAT14Q9H8E8 782 aa29.45■■■□□ 2.31
LSM7-201ENST00000252622 ZNF543Q08ER8 600 aa29.44■■■□□ 2.3
LSM7-201ENST00000252622 STOX1Q6ZVD7 989 aa29.44■■■□□ 2.3
LSM7-201ENST00000252622 CYB5R4Q7L1T6 521 aa29.44■■■□□ 2.3
LSM7-201ENST00000252622 CPXCR1Q8N123 301 aa29.44■■■□□ 2.3
LSM7-201ENST00000252622 PNMA1Q8ND90 353 aa29.44■■■□□ 2.3
LSM7-201ENST00000252622 RAVER2Q9HCJ3 691 aaKnown RBP29.44■■■□□ 2.3
LSM7-201ENST00000252622 PRR12Q9ULL5 1215 aa29.44■■■□□ 2.3
LSM7-201ENST00000252622 EN2P19622 333 aaPredicted RBP29.43■■■□□ 2.3
LSM7-201ENST00000252622 TRIM32Q13049 653 aa29.43■■■□□ 2.3
LSM7-201ENST00000252622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.43■■■□□ 2.3
LSM7-201ENST00000252622 DPP9Q86TI2 863 aa29.43■■■□□ 2.3
LSM7-201ENST00000252622 NPLOC4Q8TAT6 608 aa29.43■■■□□ 2.3
LSM7-201ENST00000252622 MMP19Q99542 508 aa29.43■■■□□ 2.3
LSM7-201ENST00000252622 PAK6Q9NQU5 681 aaPredicted RBP29.43■■■□□ 2.3
LSM7-201ENST00000252622 SLC5A4Q9NY91 659 aa29.43■■■□□ 2.3
LSM7-201ENST00000252622 RIPK3Q9Y572 518 aa29.43■■■□□ 2.3
LSM7-201ENST00000252622 BRCA2P51587 3418 aa29.43■■■□□ 2.3
LSM7-201ENST00000252622 KCTD2Q14681 263 aa29.42■■■□□ 2.3
LSM7-201ENST00000252622 SEC23AQ15436 765 aa29.42■■■□□ 2.3
LSM7-201ENST00000252622 FRMPD2Q68DX3 1309 aaPredicted RBP29.42■■■□□ 2.3
LSM7-201ENST00000252622 RPTORQ8N122 1335 aa29.42■■■□□ 2.3
LSM7-201ENST00000252622 COBLO75128 1261 aa29.41■■■□□ 2.3
LSM7-201ENST00000252622 PRKAR2AP13861 404 aaKnown RBP29.41■■■□□ 2.3
LSM7-201ENST00000252622 GJA8P48165 433 aa29.41■■■□□ 2.3
LSM7-201ENST00000252622 NECTIN1Q15223 517 aa29.41■■■□□ 2.3
LSM7-201ENST00000252622 GPATCH4Q5T3I0 446 aaKnown RBP29.41■■■□□ 2.3
LSM7-201ENST00000252622 IFIT1BQ5T764 474 aaKnown RBP29.41■■■□□ 2.3
LSM7-201ENST00000252622 SYDE2Q5VT97 1194 aa29.41■■■□□ 2.3
LSM7-201ENST00000252622 TTBK2Q6IQ55 1244 aa29.41■■■□□ 2.3
LSM7-201ENST00000252622 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.41■■■□□ 2.3
LSM7-201ENST00000252622 GPCPD1Q9NPB8 672 aa29.41■■■□□ 2.3
LSM7-201ENST00000252622 FLRT1Q9NZU1 646 aa29.41■■■□□ 2.3
LSM7-201ENST00000252622 FBXO40Q9UH90 709 aa29.41■■■□□ 2.3
LSM7-201ENST00000252622 ZNF536O15090 1300 aa29.41■■■□□ 2.3
LSM7-201ENST00000252622 SLC27A2O14975 620 aa29.4■■■□□ 2.3
LSM7-201ENST00000252622 IGHA2P01877 340 aa29.4■■■□□ 2.3
LSM7-201ENST00000252622 OLFML2BQ68BL8 750 aa29.4■■■□□ 2.3
LSM7-201ENST00000252622 CREB3L3Q68CJ9 461 aa29.4■■■□□ 2.3
LSM7-201ENST00000252622 MB21D2Q8IYB1 491 aaPredicted RBP29.4■■■□□ 2.3
LSM7-201ENST00000252622 CHST13Q8NET6 341 aa29.4■■■□□ 2.3
LSM7-201ENST00000252622 RANBP17Q9H2T7 1088 aaKnown RBP29.4■■■□□ 2.3
LSM7-201ENST00000252622 HMX1Q9NP08 348 aaPredicted RBP29.4■■■□□ 2.3
LSM7-201ENST00000252622 CAPN2P17655 700 aa29.39■■■□□ 2.3
LSM7-201ENST00000252622 SLC16A2P36021 539 aa29.39■■■□□ 2.3
LSM7-201ENST00000252622 MFSD14CQ5VZR4 134 aa29.39■■■□□ 2.3
LSM7-201ENST00000252622 U2AF1L4Q8WU68 220 aaKnown RBP29.39■■■□□ 2.3
LSM7-201ENST00000252622 SHISA4Q96DD7 197 aa29.39■■■□□ 2.3
LSM7-201ENST00000252622 CACNB2Q08289 660 aaPredicted RBP29.38■■■□□ 2.29
LSM7-201ENST00000252622 TKFCQ3LXA3 575 aa29.38■■■□□ 2.29
LSM7-201ENST00000252622 SGPL1O95470 568 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms