RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 NFIAQ12857 509 aa16.98■□□□□ 0.31
SAFB2-201ENST00000252542 ANKRD20A12PQ8NF67 263 aa16.98■□□□□ 0.31
SAFB2-201ENST00000252542 ANAPC4Q9UJX5 808 aa16.98■□□□□ 0.31
SAFB2-201ENST00000252542 MYH2Q9UKX2 1941 aa16.98■□□□□ 0.31
SAFB2-201ENST00000252542 DOT1LQ8TEK3 1739 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 ATP2B4P23634 1241 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 TEX35Q5T0J7 233 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 NELFBQ8WX92 580 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 TANGO6Q9C0B7 1094 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.97■□□□□ 0.314e-6■□□□□ 8.7
SAFB2-201ENST00000252542 SOWAHDA6NJG2 315 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 SLU7O95391 586 aaKnown RBP16.97■□□□□ 0.31
SAFB2-201ENST00000252542 FUT2Q10981 343 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 TBCKQ8TEA7 893 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 PARP3Q9Y6F1 533 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 AKAP11Q9UKA4 1901 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 UBXN1Q04323 297 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 NOC3LQ8WTT2 800 aaKnown RBP16.97■□□□□ 0.31
SAFB2-201ENST00000252542 HINFPQ9BQA5 517 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 NUP188Q5SRE5 1749 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 FLT1P17948 1338 aa16.97■□□□□ 0.31
SAFB2-201ENST00000252542 ORC4O43929 436 aa16.96■□□□□ 0.31
SAFB2-201ENST00000252542 DNA2P51530 1060 aa16.96■□□□□ 0.31
SAFB2-201ENST00000252542 FNBP4Q8N3X1 1017 aaPredicted RBP16.96■□□□□ 0.31
SAFB2-201ENST00000252542 PCDHA4Q9UN74 947 aa16.96■□□□□ 0.31
SAFB2-201ENST00000252542 DAGLAQ9Y4D2 1042 aa16.96■□□□□ 0.31
SAFB2-201ENST00000252542 LAMA4Q16363 1823 aa16.96■□□□□ 0.31
SAFB2-201ENST00000252542 TOGARAM2Q6ZUX3 1019 aa16.96■□□□□ 0.31
SAFB2-201ENST00000252542 LRRN4CLQ8ND94 238 aa16.96■□□□□ 0.31
SAFB2-201ENST00000252542 BCL9LQ86UU0 1499 aa16.96■□□□□ 0.31
SAFB2-201ENST00000252542 CLRN2A0PK11 232 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 ATRNO75882 1429 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
SAFB2-201ENST00000252542 SPECC1LQ69YQ0 1117 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 CCDC12Q8WUD4 166 aaPredicted RBP16.95■□□□□ 0.3
SAFB2-201ENST00000252542 FERMT2Q96AC1 680 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 C6orf50Q9HD87 102 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 MAD2L2Q9UI95 211 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 ABCC6O95255 1503 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 CASP14P31944 242 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 ZFPM1Q8IX07 1006 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 RTFDC1Q9BY42 306 aaPredicted RBP16.95■□□□□ 0.3
SAFB2-201ENST00000252542 SLC39A2Q9NP94 309 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 GNAQP50148 359 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 PDE4DQ08499 809 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 RBL2Q08999 1139 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 IL17AQ16552 155 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 CCDC148Q8NFR7 591 aa16.95■□□□□ 0.3
SAFB2-201ENST00000252542 MAGEC2Q9UBF1 373 aaPredicted RBP16.95■□□□□ 0.3
SAFB2-201ENST00000252542 PUF60Q9UHX1 559 aaKnown RBP16.95■□□□□ 0.3
SAFB2-201ENST00000252542 A0A0U1RQJ8 604 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 POTEMA6NI47 508 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 IKBKBO14920 756 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 CDC25BP30305 580 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 LRRC41Q15345 812 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 ATRIPQ8WXE1 791 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 CARD6Q9BX69 1037 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
SAFB2-201ENST00000252542 CCDC66A2RUB6 948 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 KRT18P05783 430 aaKnown RBP16.94■□□□□ 0.3
SAFB2-201ENST00000252542 GABPB1Q06547 395 aaPredicted RBP16.94■□□□□ 0.3
SAFB2-201ENST00000252542 DPYDQ12882 1025 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 PPP2R5BQ15173 497 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 TSR1Q2NL82 804 aaKnown RBP16.94■□□□□ 0.3
SAFB2-201ENST00000252542 VSTM4Q8IW00 320 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 REXO1Q8N1G1 1221 aaKnown RBP16.94■□□□□ 0.3
SAFB2-201ENST00000252542 VEZTQ9HBM0 779 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 DDX4Q9NQI0 724 aaKnown RBP16.94■□□□□ 0.3
SAFB2-201ENST00000252542 TFR2Q9UP52 801 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 NWD2Q9ULI1 1742 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 MTIF2P46199 727 aaKnown RBP16.94■□□□□ 0.3
SAFB2-201ENST00000252542 NONOQ15233 471 aaKnown RBP eCLIP16.94■□□□□ 0.35e-6■■■□□ 15.8
SAFB2-201ENST00000252542 TERF2Q15554 542 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 ARHGAP29Q52LW3 1261 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 CABP7Q86V35 215 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 FCHSD1Q86WN1 690 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 DGKHQ86XP1 1220 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 HSD3B7Q9H2F3 369 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 PCDHA6Q9UN73 950 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 PCDHA8Q9Y5H6 950 aa16.94■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L15C9J2P7 530 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L13C9JLJ4 530 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L11C9JVI0 530 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L18D6R9N7 530 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L22D6RA61 530 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L17D6RBQ6 530 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L19D6RCP7 530 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L20D6RJB6 530 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 BBOX1O75936 387 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 TDP2O95551 362 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 RPN1P04843 607 aaKnown RBP16.93■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L24Q0WX57 530 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 USP17L6PQ6QN14 398 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 POTEDQ86YR6 584 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 SLF2Q8IX21 1173 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 PAK1Q13153 545 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 MORC3Q14149 939 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 SLC30A10Q6XR72 485 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 ERO1AQ96HE7 468 aa16.93■□□□□ 0.3
SAFB2-201ENST00000252542 KANSL2Q9H9L4 492 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms