RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 GRB14Q14449 540 aa28.62■■■□□ 2.17
SDF2L1-201ENST00000248958 NCAPG2Q86XI2 1143 aa28.62■■■□□ 2.17
SDF2L1-201ENST00000248958 ZSCAN10Q96SZ4 725 aaPredicted RBP28.62■■■□□ 2.17
SDF2L1-201ENST00000248958 APBA2Q99767 749 aa28.62■■■□□ 2.17
SDF2L1-201ENST00000248958 LSG1Q9H089 658 aaKnown RBP28.62■■■□□ 2.17
SDF2L1-201ENST00000248958 HMGCRP04035 888 aa28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 ELNP15502 786 aa28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 OAZ1P54368 228 aa28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 IKQ13123 557 aaPredicted RBP28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 ABRAQ8N0Z2 381 aa28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 NKX2-3Q8TAU0 364 aa28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 ZKSCAN3Q9BRR0 538 aa28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 UBAC1Q9BSL1 405 aa28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 TEX13BQ9BXU2 312 aa28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 SLC38A10Q9HBR0 1119 aa28.61■■■□□ 2.17
SDF2L1-201ENST00000248958 INHAP05111 366 aa28.6■■■□□ 2.17
SDF2L1-201ENST00000248958 NCOA7Q8NI08 942 aa28.6■■■□□ 2.17
SDF2L1-201ENST00000248958 ANO2Q9NQ90 1003 aa28.6■■■□□ 2.17
SDF2L1-201ENST00000248958 HTTP42858 3142 aa28.59■■■□□ 2.17
SDF2L1-201ENST00000248958 HOXC6P09630 235 aa28.59■■■□□ 2.17
SDF2L1-201ENST00000248958 CCDC96Q2M329 555 aa28.59■■■□□ 2.17
SDF2L1-201ENST00000248958 KCTD1Q719H9 257 aa28.59■■■□□ 2.17
SDF2L1-201ENST00000248958 RALYLQ86SE5 291 aaKnown RBP28.59■■■□□ 2.17
SDF2L1-201ENST00000248958 KAT14Q9H8E8 782 aa28.59■■■□□ 2.17
SDF2L1-201ENST00000248958 SLC5A4Q9NY91 659 aa28.59■■■□□ 2.17
SDF2L1-201ENST00000248958 MTMR7Q9Y216 660 aa28.59■■■□□ 2.17
SDF2L1-201ENST00000248958 E7EWF7 191 aa28.58■■■□□ 2.17
SDF2L1-201ENST00000248958 PDHBP11177 359 aa28.58■■■□□ 2.17
SDF2L1-201ENST00000248958 ZKSCAN1P17029 563 aaPredicted RBP28.58■■■□□ 2.17
SDF2L1-201ENST00000248958 CAPN2P17655 700 aa28.58■■■□□ 2.17
SDF2L1-201ENST00000248958 TNKSO95271 1327 aa28.58■■■□□ 2.17
SDF2L1-201ENST00000248958 ZNFX1Q9P2E3 1918 aaKnown RBP28.57■■■□□ 2.16
SDF2L1-201ENST00000248958 FCER1AP12319 257 aa28.57■■■□□ 2.16
SDF2L1-201ENST00000248958 CCL5P13501 91 aa28.57■■■□□ 2.16
SDF2L1-201ENST00000248958 MTFR1Q15390 333 aa28.57■■■□□ 2.16
SDF2L1-201ENST00000248958 SNRNP48Q6IEG0 339 aaKnown RBP28.57■■■□□ 2.16
SDF2L1-201ENST00000248958 BTNL9Q6UXG8 535 aa28.57■■■□□ 2.16
SDF2L1-201ENST00000248958 DPP9Q86TI2 863 aa28.57■■■□□ 2.16
SDF2L1-201ENST00000248958 ENAHQ8N8S7 591 aaPredicted RBP28.57■■■□□ 2.16
SDF2L1-201ENST00000248958 TRIB2Q92519 343 aa28.57■■■□□ 2.16
SDF2L1-201ENST00000248958 MYCP01106 439 aaPredicted RBP28.56■■■□□ 2.16
SDF2L1-201ENST00000248958 SNHG28P0DPA3 235 aa28.56■■■□□ 2.16
SDF2L1-201ENST00000248958 CPXCR1Q8N123 301 aa28.56■■■□□ 2.16
SDF2L1-201ENST00000248958 PNMA1Q8ND90 353 aa28.56■■■□□ 2.16
SDF2L1-201ENST00000248958 RNF208Q9H0X6 261 aa28.56■■■□□ 2.16
SDF2L1-201ENST00000248958 POTEFA5A3E0 1075 aa28.55■■■□□ 2.16
SDF2L1-201ENST00000248958 ADORA2AP29274 412 aa28.55■■■□□ 2.16
SDF2L1-201ENST00000248958 NECTIN1Q15223 517 aa28.55■■■□□ 2.16
SDF2L1-201ENST00000248958 GPATCH4Q5T3I0 446 aaKnown RBP28.55■■■□□ 2.16
SDF2L1-201ENST00000248958 MMP19Q99542 508 aa28.55■■■□□ 2.16
SDF2L1-201ENST00000248958 PRR12Q9ULL5 1215 aa28.55■■■□□ 2.16
SDF2L1-201ENST00000248958 ERICH2A1L162 156 aa28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 GJB1P08034 283 aa28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 ZNF543Q08ER8 600 aa28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 KCTD2Q14681 263 aa28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 IFIT1BQ5T764 474 aaKnown RBP28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 RNF20Q5VTR2 975 aa28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 CYB5R4Q7L1T6 521 aa28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 CHMP4CQ96CF2 233 aa28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 RAVER2Q9HCJ3 691 aaKnown RBP28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 FBXO40Q9UH90 709 aa28.54■■■□□ 2.16
SDF2L1-201ENST00000248958 RPTORQ8N122 1335 aa28.53■■■□□ 2.16
SDF2L1-201ENST00000248958 SART3Q15020 963 aaKnown RBP28.53■■■□□ 2.16
SDF2L1-201ENST00000248958 CHST13Q8NET6 341 aa28.53■■■□□ 2.16
SDF2L1-201ENST00000248958 UNC93B1Q9H1C4 597 aa28.53■■■□□ 2.16
SDF2L1-201ENST00000248958 FRMPD2Q68DX3 1309 aaPredicted RBP28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 SLC27A2O14975 620 aa28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 SEC23AQ15436 765 aa28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 TKFCQ3LXA3 575 aa28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 MFSD14CQ5VZR4 134 aa28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 STOX1Q6ZVD7 989 aa28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.52■■■□□ 2.168e-9■■■■■ 29.3
SDF2L1-201ENST00000248958 RASGRP2Q7LDG7 609 aa28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 MTA3Q9BTC8 594 aa28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 HMX1Q9NP08 348 aaPredicted RBP28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 PNMA2Q9UL42 364 aa28.52■■■□□ 2.16
SDF2L1-201ENST00000248958 GJA8P48165 433 aa28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 MAP3K21Q5TCX8 1036 aa28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 SYDE2Q5VT97 1194 aa28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 OLFML2BQ68BL8 750 aa28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 CREB3L3Q68CJ9 461 aa28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 TTBK2Q6IQ55 1244 aa28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 NPLOC4Q8TAT6 608 aa28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 GPCPD1Q9NPB8 672 aa28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 DIS3Q9Y2L1 958 aaKnown RBP28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 KIAA0100Q14667 2235 aaKnown RBP28.51■■■□□ 2.15
SDF2L1-201ENST00000248958 IFIT3O14879 490 aaKnown RBP28.5■■■□□ 2.15
SDF2L1-201ENST00000248958 EN2P19622 333 aaPredicted RBP28.5■■■□□ 2.15
SDF2L1-201ENST00000248958 CCL14Q16627 93 aa28.5■■■□□ 2.15
SDF2L1-201ENST00000248958 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.5■■■□□ 2.158e-7■□□□□ 8.8
SDF2L1-201ENST00000248958 RANBP17Q9H2T7 1088 aaKnown RBP28.5■■■□□ 2.15
SDF2L1-201ENST00000248958 PAK6Q9NQU5 681 aaPredicted RBP28.5■■■□□ 2.15
SDF2L1-201ENST00000248958 RIPK3Q9Y572 518 aa28.5■■■□□ 2.15
SDF2L1-201ENST00000248958 TAF6LQ9Y6J9 622 aa28.5■■■□□ 2.15
SDF2L1-201ENST00000248958 PLXNA1Q9UIW2 1896 aa28.49■■■□□ 2.15
SDF2L1-201ENST00000248958 COBLO75128 1261 aa28.49■■■□□ 2.15
SDF2L1-201ENST00000248958 SLC4A3P48751 1232 aa28.49■■■□□ 2.15
SDF2L1-201ENST00000248958 ASPRV1Q53RT3 343 aa28.49■■■□□ 2.15
SDF2L1-201ENST00000248958 MB21D2Q8IYB1 491 aaPredicted RBP28.49■■■□□ 2.15
SDF2L1-201ENST00000248958 ZNF536O15090 1300 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms