RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 GDF15Q99988 308 aa21.34■■□□□ 1.01
PFN1-201ENST00000225655 ZMYND8Q9ULU4 1186 aaPredicted RBP21.34■■□□□ 1.01
PFN1-201ENST00000225655 FOXP2O15409 715 aa21.33■■□□□ 1.01
PFN1-201ENST00000225655 SEPT4O43236 478 aa21.33■■□□□ 1.01
PFN1-201ENST00000225655 TSPY3P0CV98 308 aa21.33■■□□□ 1.01
PFN1-201ENST00000225655 TSPY8P0CW00 308 aa21.33■■□□□ 1.01
PFN1-201ENST00000225655 BMP8BP34820 402 aa21.33■■□□□ 1.01
PFN1-201ENST00000225655 LRRC26Q2I0M4 334 aa21.33■■□□□ 1.01
PFN1-201ENST00000225655 CASC1Q6TDU7 716 aa21.33■■□□□ 1.01
PFN1-201ENST00000225655 TEX13BQ9BXU2 312 aa21.33■■□□□ 1.01
PFN1-201ENST00000225655 NRBP1Q9UHY1 535 aa21.33■■□□□ 1.01
PFN1-201ENST00000225655 DIS3Q9Y2L1 958 aaKnown RBP21.33■■□□□ 1.01
PFN1-201ENST00000225655 ATP2A1O14983 1001 aa21.32■■□□□ 1
PFN1-201ENST00000225655 TFAP4Q01664 338 aa21.32■■□□□ 1
PFN1-201ENST00000225655 CCDC129Q6ZRS4 1044 aa21.32■■□□□ 1
PFN1-201ENST00000225655 ARRDC4Q8NCT1 418 aa21.32■■□□□ 1
PFN1-201ENST00000225655 FEM1BQ9UK73 627 aa21.32■■□□□ 1
PFN1-201ENST00000225655 PGK2P07205 417 aa21.31■■□□□ 1
PFN1-201ENST00000225655 SYN1P17600 705 aa21.31■■□□□ 1
PFN1-201ENST00000225655 MFAP1P55081 439 aaKnown RBP21.31■■□□□ 1
PFN1-201ENST00000225655 ZNF792Q3KQV3 632 aa21.31■■□□□ 1
PFN1-201ENST00000225655 FAM47AQ5JRC9 791 aa21.31■■□□□ 1
PFN1-201ENST00000225655 PRAMEF19Q5SWL8 479 aa21.31■■□□□ 1
PFN1-201ENST00000225655 SNRNP48Q6IEG0 339 aaKnown RBP21.31■■□□□ 1
PFN1-201ENST00000225655 SKAP1Q86WV1 359 aa21.31■■□□□ 1
PFN1-201ENST00000225655 LRRC47Q8N1G4 583 aaKnown RBP21.31■■□□□ 1
PFN1-201ENST00000225655 RUFY2Q8WXA3 655 aa21.31■■□□□ 1
PFN1-201ENST00000225655 SENP6Q9GZR1 1112 aaPredicted RBP21.31■■□□□ 1
PFN1-201ENST00000225655 HELLSQ9NRZ9 838 aa21.31■■□□□ 1
PFN1-201ENST00000225655 ZBED4O75132 1171 aa21.3■■□□□ 1
PFN1-201ENST00000225655 TINF2Q9BSI4 451 aa21.3■■□□□ 1
PFN1-201ENST00000225655 SLC38A10Q9HBR0 1119 aa21.3■■□□□ 1
PFN1-201ENST00000225655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.3■■□□□ 1
PFN1-201ENST00000225655 BMP3P12645 472 aa21.29■■□□□ 1
PFN1-201ENST00000225655 MAGEA10P43363 369 aaPredicted RBP21.29■■□□□ 1
PFN1-201ENST00000225655 PPP4R3BQ5MIZ7 849 aa21.29■■□□□ 1
PFN1-201ENST00000225655 SLFN13Q68D06 897 aa21.29■■□□□ 1
PFN1-201ENST00000225655 KIFC2Q96AC6 838 aa21.29■■□□□ 1
PFN1-201ENST00000225655 ANAPC4Q9UJX5 808 aa21.29■■□□□ 1
PFN1-201ENST00000225655 OAZ1P54368 228 aa21.28■■□□□ 1
PFN1-201ENST00000225655 CTDSPL2Q05D32 466 aa21.28■■□□□ 1
PFN1-201ENST00000225655 ALX1Q15699 326 aa21.28■■□□□ 1
PFN1-201ENST00000225655 MCMDC2Q4G0Z9 681 aa21.28■■□□□ 1
PFN1-201ENST00000225655 GJC2Q5T442 439 aaPredicted RBP21.28■■□□□ 1
PFN1-201ENST00000225655 VPS53Q5VIR6 699 aa21.28■■□□□ 1
PFN1-201ENST00000225655 ANO1Q5XXA6 986 aa21.28■■□□□ 1
PFN1-201ENST00000225655 RIPK3Q9Y572 518 aa21.28■■□□□ 1
PFN1-201ENST00000225655 CTDP1Q9Y5B0 961 aaPredicted RBP21.28■■□□□ 1
PFN1-201ENST00000225655 SMCHD1A6NHR9 2005 aa21.28■■□□□ 1
PFN1-201ENST00000225655 KBTBD13C9JR72 458 aa21.27■■□□□ 1
PFN1-201ENST00000225655 NMIQ13287 307 aaPredicted RBP21.27■■□□□ 1
PFN1-201ENST00000225655 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.27■■□□□ 1
PFN1-201ENST00000225655 CPXCR1Q8N123 301 aa21.27■■□□□ 1
PFN1-201ENST00000225655 MSL3Q8N5Y2 521 aaKnown RBP21.27■■□□□ 1
PFN1-201ENST00000225655 GMCL1Q96IK5 515 aa21.27■■□□□ 1
PFN1-201ENST00000225655 DNAJC25-GNG10A0A024R161 153 aa21.26■□□□□ 0.99
PFN1-201ENST00000225655 A0A0D9SFI3 127 aa21.26■□□□□ 0.99
PFN1-201ENST00000225655 TSPY2A6NKD2 308 aa21.26■□□□□ 0.99
PFN1-201ENST00000225655 FDX1P10109 184 aa21.26■□□□□ 0.99
PFN1-201ENST00000225655 CWC27Q6UX04 472 aaKnown RBP21.26■□□□□ 0.99
PFN1-201ENST00000225655 DDX11Q96FC9 970 aa21.26■□□□□ 0.99
PFN1-201ENST00000225655 FAM227BQ96M60 508 aa21.26■□□□□ 0.99
PFN1-201ENST00000225655 RAVER2Q9HCJ3 691 aaKnown RBP21.26■□□□□ 0.99
PFN1-201ENST00000225655 IL17RBQ9NRM6 502 aa21.26■□□□□ 0.99
PFN1-201ENST00000225655 RAD50Q92878 1312 aa21.26■□□□□ 0.99
PFN1-201ENST00000225655 ORC4O43929 436 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 CDC45O75419 566 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 FGRP09769 529 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 RARBP10826 455 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 STAT2P52630 851 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 ATN1P54259 1190 aaPredicted RBP21.25■□□□□ 0.99
PFN1-201ENST00000225655 LRRC41Q15345 812 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 MAMDC4Q6UXC1 1216 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 CHST13Q8NET6 341 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 INCENPQ9NQS7 918 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 STX8Q9UNK0 236 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 CNPY2Q9Y2B0 182 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 SYNGAP1Q96PV0 1343 aa21.25■□□□□ 0.99
PFN1-201ENST00000225655 TMEM232C9JQI7 657 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 SOX1O00570 391 aaPredicted RBP21.24■□□□□ 0.99
PFN1-201ENST00000225655 ZNF865P0CJ78 1059 aaPredicted RBP21.24■□□□□ 0.99
PFN1-201ENST00000225655 CHMLP26374 656 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 SLC1A4P43007 532 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 NOVP48745 357 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 ZNF467Q7Z7K2 595 aaPredicted RBP21.24■□□□□ 0.99
PFN1-201ENST00000225655 FAM160B2Q86V87 743 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 CHURC1Q8WUH1 139 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 STAG1Q8WVM7 1258 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 UBE2OQ9C0C9 1292 aaKnown RBP21.24■□□□□ 0.99
PFN1-201ENST00000225655 XPNPEP3Q9NQH7 507 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 TACC3Q9Y6A5 838 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 ZMYM6O95789 1325 aa21.24■□□□□ 0.99
PFN1-201ENST00000225655 SZT2Q5T011 3432 aa21.23■□□□□ 0.99
PFN1-201ENST00000225655 RANBP6O60518 1105 aaKnown RBP21.23■□□□□ 0.99
PFN1-201ENST00000225655 NMT2O60551 498 aa21.23■□□□□ 0.99
PFN1-201ENST00000225655 PLA2G6O60733 806 aa21.23■□□□□ 0.99
PFN1-201ENST00000225655 FGAP02671 866 aa21.23■□□□□ 0.99
PFN1-201ENST00000225655 MYCNP04198 464 aaPredicted RBP21.23■□□□□ 0.99
PFN1-201ENST00000225655 HSPD1P10809 573 aaKnown RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms