RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 MED15Q96RN5 788 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 FANCGO15287 622 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 STX10O60499 249 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 ALDH1B1P30837 517 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 PIK3AP1Q6ZUJ8 805 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 SH3RF1Q7Z6J0 888 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 GRAMD1CQ8IYS0 662 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 ZNF446Q9NWS9 450 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 PPP2R2CQ9Y2T4 447 aa25.17■■□□□ 1.62
CCDC9-201ENST00000221922 USP17L3A6NCW0 530 aa25.16■■□□□ 1.62
CCDC9-201ENST00000221922 USP17L4A6NCW7 530 aa25.16■■□□□ 1.62
CCDC9-201ENST00000221922 GTF2IP78347 998 aa25.16■■□□□ 1.62
CCDC9-201ENST00000221922 USP17L1Q7RTZ2 530 aa25.16■■□□□ 1.62
CCDC9-201ENST00000221922 FAM177A1Q8N128 213 aaPredicted RBP25.16■■□□□ 1.62
CCDC9-201ENST00000221922 TC2NQ8N9U0 490 aa25.16■■□□□ 1.62
CCDC9-201ENST00000221922 BAG1Q99933 345 aaPredicted RBP25.16■■□□□ 1.62
CCDC9-201ENST00000221922 VWA3AA6NCI4 1184 aa25.16■■□□□ 1.62
CCDC9-201ENST00000221922 WNT7AO00755 349 aa25.16■■□□□ 1.62
CCDC9-201ENST00000221922 PTPN21Q16825 1174 aa25.16■■□□□ 1.62
CCDC9-201ENST00000221922 DAGLAQ9Y4D2 1042 aa25.16■■□□□ 1.62
CCDC9-201ENST00000221922 RGPD3A6NKT7 1758 aaPredicted RBP25.15■■□□□ 1.62
CCDC9-201ENST00000221922 RGPD4Q7Z3J3 1758 aa25.15■■□□□ 1.62
CCDC9-201ENST00000221922 A0A087X0B3 334 aa25.15■■□□□ 1.62
CCDC9-201ENST00000221922 GOLGA6L9A6NEM1 432 aa25.15■■□□□ 1.62
CCDC9-201ENST00000221922 CDK11BP21127 795 aaKnown RBP25.15■■□□□ 1.62
CCDC9-201ENST00000221922 CDK8P49336 464 aa25.15■■□□□ 1.62
CCDC9-201ENST00000221922 NOM1Q5C9Z4 860 aaKnown RBP25.15■■□□□ 1.62
CCDC9-201ENST00000221922 BLIDQ8IZY5 108 aa25.15■■□□□ 1.62
CCDC9-201ENST00000221922 PAGE5Q96GU1 130 aa25.15■■□□□ 1.62
CCDC9-201ENST00000221922 LZTS2Q9BRK4 669 aa25.15■■□□□ 1.62
CCDC9-201ENST00000221922 PCDHA4Q9UN74 947 aa25.15■■□□□ 1.62
CCDC9-201ENST00000221922 ARL6IP4Q66PJ3 421 aaKnown RBP25.14■■□□□ 1.62
CCDC9-201ENST00000221922 GALNT17Q6IS24 598 aa25.14■■□□□ 1.62
CCDC9-201ENST00000221922 CCDC148Q8NFR7 591 aa25.14■■□□□ 1.62
CCDC9-201ENST00000221922 GSDMAQ96QA5 445 aa25.14■■□□□ 1.62
CCDC9-201ENST00000221922 ZC3H12CQ9C0D7 883 aaKnown RBP25.14■■□□□ 1.62
CCDC9-201ENST00000221922 MAD2L2Q9UI95 211 aa25.14■■□□□ 1.62
CCDC9-201ENST00000221922 PARP3Q9Y6F1 533 aa25.14■■□□□ 1.62
CCDC9-201ENST00000221922 RIMBP2O15034 1052 aa25.14■■□□□ 1.61
CCDC9-201ENST00000221922 MMP10P09238 476 aa25.14■■□□□ 1.61
CCDC9-201ENST00000221922 NR1I3Q14994 352 aa25.14■■□□□ 1.61
CCDC9-201ENST00000221922 NEDD1Q8NHV4 660 aa25.14■■□□□ 1.61
CCDC9-201ENST00000221922 ZHX1Q9UKY1 873 aaPredicted RBP25.14■■□□□ 1.61
CCDC9-201ENST00000221922 HSP90AA4PQ58FG1 418 aa25.13■■□□□ 1.61
CCDC9-201ENST00000221922 TRMT44Q8IYL2 757 aaKnown RBP25.13■■□□□ 1.61
CCDC9-201ENST00000221922 MASTLQ96GX5 879 aa25.13■■□□□ 1.61
CCDC9-201ENST00000221922 EYA3Q99504 573 aa25.13■■□□□ 1.61
CCDC9-201ENST00000221922 TMEM47Q9BQJ4 181 aa25.13■■□□□ 1.61
CCDC9-201ENST00000221922 TNS1Q9HBL0 1735 aaKnown RBP25.13■■□□□ 1.61
CCDC9-201ENST00000221922 STAG2Q8N3U4 1231 aa25.13■■□□□ 1.61
CCDC9-201ENST00000221922 IQUBQ8NA54 791 aa25.13■■□□□ 1.61
CCDC9-201ENST00000221922 A0A1B0GTH6 734 aa25.12■■□□□ 1.61
CCDC9-201ENST00000221922 AFMP43652 599 aa25.12■■□□□ 1.61
CCDC9-201ENST00000221922 DPP8Q6V1X1 898 aaPredicted RBP25.12■■□□□ 1.61
CCDC9-201ENST00000221922 SAMSN1Q9NSI8 373 aaKnown RBP25.12■■□□□ 1.61
CCDC9-201ENST00000221922 MCM7P33993 719 aa25.11■■□□□ 1.61
CCDC9-201ENST00000221922 DPYDQ12882 1025 aa25.11■■□□□ 1.61
CCDC9-201ENST00000221922 ARHGAP29Q52LW3 1261 aa25.11■■□□□ 1.61
CCDC9-201ENST00000221922 DAGLBQ8NCG7 672 aa25.11■■□□□ 1.61
CCDC9-201ENST00000221922 PALM3A6NDB9 673 aaPredicted RBP25.11■■□□□ 1.61
CCDC9-201ENST00000221922 TADA3O75528 432 aa25.11■■□□□ 1.61
CCDC9-201ENST00000221922 VEGFAP15692 232 aaPredicted RBP25.11■■□□□ 1.61
CCDC9-201ENST00000221922 STX8Q9UNK0 236 aa25.11■■□□□ 1.61
CCDC9-201ENST00000221922 URI1O94763 535 aaPredicted RBP25.1■■□□□ 1.61
CCDC9-201ENST00000221922 LONP1P36776 959 aaKnown RBP25.1■■□□□ 1.61
CCDC9-201ENST00000221922 CLCN6P51797 869 aa25.1■■□□□ 1.61
CCDC9-201ENST00000221922 CERS5Q8N5B7 392 aa25.1■■□□□ 1.61
CCDC9-201ENST00000221922 UBXN4Q92575 508 aa25.1■■□□□ 1.61
CCDC9-201ENST00000221922 GPKOWQ92917 476 aaPredicted RBP eCLIP25.1■■□□□ 1.61
CCDC9-201ENST00000221922 TMX4Q9H1E5 349 aaPredicted RBP25.1■■□□□ 1.61
CCDC9-201ENST00000221922 EFCAB8A8MWE9 144 aa25.09■■□□□ 1.61
CCDC9-201ENST00000221922 NOVP48745 357 aa25.09■■□□□ 1.61
CCDC9-201ENST00000221922 ADKP55263 362 aaKnown RBP25.09■■□□□ 1.61
CCDC9-201ENST00000221922 BMS1Q14692 1282 aaKnown RBP25.09■■□□□ 1.61
CCDC9-201ENST00000221922 APTXQ7Z2E3 356 aaKnown RBP25.09■■□□□ 1.61
CCDC9-201ENST00000221922 PLIN4Q96Q06 1357 aa25.09■■□□□ 1.61
CCDC9-201ENST00000221922 CCDC194A0A1B0GVG4 234 aa25.09■■□□□ 1.61
CCDC9-201ENST00000221922 TXLNAP40222 546 aa25.09■■□□□ 1.61
CCDC9-201ENST00000221922 E2F4Q16254 413 aa25.09■■□□□ 1.61
CCDC9-201ENST00000221922 SPATA1Q5VX52 437 aa25.09■■□□□ 1.61
CCDC9-201ENST00000221922 TOGARAM2Q6ZUX3 1019 aa25.09■■□□□ 1.61
CCDC9-201ENST00000221922 CUL4BQ13620 913 aa25.08■■□□□ 1.61
CCDC9-201ENST00000221922 MNS1Q8NEH6 495 aa25.08■■□□□ 1.61
CCDC9-201ENST00000221922 PANX2Q96RD6 677 aa25.08■■□□□ 1.61
CCDC9-201ENST00000221922 BARHL2Q9NY43 387 aa25.08■■□□□ 1.61
CCDC9-201ENST00000221922 M0R2N6 131 aa25.08■■□□□ 1.6
CCDC9-201ENST00000221922 SLC35G1Q2M3R5 365 aa25.08■■□□□ 1.6
CCDC9-201ENST00000221922 SPZ1Q9BXG8 430 aa25.08■■□□□ 1.6
CCDC9-201ENST00000221922 TPM1P09493 284 aa25.07■■□□□ 1.6
CCDC9-201ENST00000221922 MAP3K9P80192 1104 aa25.07■■□□□ 1.6
CCDC9-201ENST00000221922 TERF2Q15554 542 aa25.07■■□□□ 1.6
CCDC9-201ENST00000221922 WWC2Q6AWC2 1192 aa25.07■■□□□ 1.6
CCDC9-201ENST00000221922 SYNRGQ9UMZ2 1314 aa25.07■■□□□ 1.6
CCDC9-201ENST00000221922 FHOD1Q9Y613 1164 aa25.07■■□□□ 1.6
CCDC9-201ENST00000221922 CYTH3O43739 400 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 HEATR3Q7Z4Q2 680 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 C4orf32Q8N8J7 132 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 CCDC12Q8WUD4 166 aaPredicted RBP25.06■■□□□ 1.6
CCDC9-201ENST00000221922 WDR24Q96S15 920 aa25.06■■□□□ 1.6
CCDC9-201ENST00000221922 CARD6Q9BX69 1037 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms