RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TCHPQ9BT92 498 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 TRMT1Q9NXH9 659 aaKnown RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 SERPINA10Q9UK55 444 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 NEFHP12036 1026 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 SNAP25P60880 206 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 CALCRLQ16602 461 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 STX1AQ16623 288 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 AGBL3Q8NEM8 1001 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 BICD1Q96G01 975 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 PDGFDQ9GZP0 370 aaPredicted RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 TMEM39BQ9GZU3 492 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 HERC5Q9UII4 1024 aaKnown RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 PLEKHA8P1O95397 391 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 ENOX2Q16206 610 aaKnown RBP10.57□□□□□ -0.72
CCDC113-201ENST00000219299 STOX1Q6ZVD7 989 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 TAX1BP1Q86VP1 789 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 CLEC10AQ8IUN9 316 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 USP28Q96RU2 1077 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 DEFB129Q9H1M3 183 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 HACL1Q9UJ83 578 aa10.57□□□□□ -0.72
CCDC113-201ENST00000219299 USP17L5A8MUK1 530 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 F5H6K3 240 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 MTIF2P46199 727 aaKnown RBP10.56□□□□□ -0.72
CCDC113-201ENST00000219299 LMAN1P49257 510 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 KLRC3Q07444 240 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 NFIAQ12857 509 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 PRR16Q569H4 304 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 ARHGEF16Q5VV41 709 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 UBXN2AP68543 259 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 CCDC40Q4G0X9 1142 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 MB21D2Q8IYB1 491 aaPredicted RBP10.56□□□□□ -0.72
CCDC113-201ENST00000219299 NEDD1Q8NHV4 660 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 TRIM47Q96LD4 638 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 NUP88Q99567 741 aaPredicted RBP10.56□□□□□ -0.72
CCDC113-201ENST00000219299 POLR2DO15514 142 aaKnown RBP10.56□□□□□ -0.72
CCDC113-201ENST00000219299 GTF2A1P52655 376 aaPredicted RBP10.56□□□□□ -0.72
CCDC113-201ENST00000219299 SEPT7Q16181 437 aaKnown RBP10.56□□□□□ -0.72
CCDC113-201ENST00000219299 SNX29Q8TEQ0 813 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 TAF4BQ92750 862 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 KCNH3Q9ULD8 1083 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 MRC1P22897 1456 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 FGFR1OPO95684 399 aaKnown RBP10.56□□□□□ -0.72
CCDC113-201ENST00000219299 IVLP07476 585 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 AKT1S1Q96B36 256 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 RMND1Q9NWS8 449 aa10.56□□□□□ -0.72
CCDC113-201ENST00000219299 ATRNO75882 1429 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 USP17L10C9JJH3 530 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 DDNO94850 711 aaPredicted RBP10.55□□□□□ -0.72
CCDC113-201ENST00000219299 TOB2Q14106 344 aaPredicted RBP10.55□□□□□ -0.72
CCDC113-201ENST00000219299 SYDE2Q5VT97 1194 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 EPB41L4AQ9HCS5 686 aaPredicted RBP10.55□□□□□ -0.72
CCDC113-201ENST00000219299 KCNQ5Q9NR82 932 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 GJB4Q9NTQ9 266 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 GINS2Q9Y248 185 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 RPS12P25398 132 aaKnown RBP10.55□□□□□ -0.72
CCDC113-201ENST00000219299 NR5A1Q13285 461 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 KCTD2Q14681 263 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 FAM83BQ5T0W9 1011 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 MCF2L2Q86YR7 1114 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 STAMQ92783 540 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 ENTPD3O75355 529 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
CCDC113-201ENST00000219299 NEK8Q86SG6 692 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 NLRX1Q86UT6 975 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 FAM151AQ8WW52 585 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 PGBD1Q96JS3 809 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 FAM13AO94988 1023 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 CCDC150Q8NCX0 1101 aa10.55□□□□□ -0.72
CCDC113-201ENST00000219299 SORBS3O60504 671 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 GAS7O60861 476 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 IGSF3O75054 1194 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 CUL4AQ13619 759 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 BRDTQ58F21 947 aaPredicted RBP10.54□□□□□ -0.72
CCDC113-201ENST00000219299 HAUS3Q68CZ6 603 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 CCDC84Q86UT8 332 aaPredicted RBP10.54□□□□□ -0.72
CCDC113-201ENST00000219299 SEPT11Q9NVA2 429 aaKnown RBP10.54□□□□□ -0.72
CCDC113-201ENST00000219299 TAF6LQ9Y6J9 622 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 SETD1AO15047 1707 aaKnown RBP10.54□□□□□ -0.72
CCDC113-201ENST00000219299 CDC37Q16543 378 aaPredicted RBP10.54□□□□□ -0.72
CCDC113-201ENST00000219299 FKBP15Q5T1M5 1219 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 MAEAQ7L5Y9 396 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 DPP9Q86TI2 863 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 CUTAO60888 179 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 TUBB4AP04350 444 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 STX17P56962 302 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 CCNA1P78396 465 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 RAD51AP2Q09MP3 1159 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 AMIGO3Q86WK7 504 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 DNAJC25Q9H1X3 360 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 LY9Q9HBG7 655 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 PCDHA12Q9UN75 941 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 PSMA7O14818 248 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 ORC4O43929 436 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 POTEJP0CG39 1038 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 OSBPP22059 807 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 NT5C2P49902 561 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 PPP4CP60510 307 aa10.54□□□□□ -0.72
CCDC113-201ENST00000219299 HDLBPQ00341 1268 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms