RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 CDK5RAP2Q96SN8 1893 aa14.62□□□□□ -0.07
RIPK3-201ENST00000216274 HSPA6P17066 643 aa14.62□□□□□ -0.07
RIPK3-201ENST00000216274 POSTNQ15063 836 aa14.62□□□□□ -0.07
RIPK3-201ENST00000216274 GALNT17Q6IS24 598 aa14.62□□□□□ -0.07
RIPK3-201ENST00000216274 CCDC148Q8NFR7 591 aa14.62□□□□□ -0.07
RIPK3-201ENST00000216274 TRPM4Q8TD43 1214 aa14.62□□□□□ -0.07
RIPK3-201ENST00000216274 CSRNP2Q9H175 543 aa14.62□□□□□ -0.07
RIPK3-201ENST00000216274 DACH1Q9UI36 760 aa14.62□□□□□ -0.07
RIPK3-201ENST00000216274 HDAC9Q9UKV0 1011 aa14.62□□□□□ -0.07
RIPK3-201ENST00000216274 FAM205CA6NFA0 338 aa14.61□□□□□ -0.07
RIPK3-201ENST00000216274 POLR2DO15514 142 aaKnown RBP14.61□□□□□ -0.07
RIPK3-201ENST00000216274 MDM2Q00987 491 aaPredicted RBP14.61□□□□□ -0.07
RIPK3-201ENST00000216274 KIF4BQ2VIQ3 1234 aa14.61□□□□□ -0.07
RIPK3-201ENST00000216274 SPECC1Q5M775 1068 aa14.61□□□□□ -0.07
RIPK3-201ENST00000216274 DNTTIP2Q5QJE6 756 aaKnown RBP14.61□□□□□ -0.07
RIPK3-201ENST00000216274 TRIML1Q8N9V2 468 aa14.61□□□□□ -0.07
RIPK3-201ENST00000216274 TMEM47Q9BQJ4 181 aa14.61□□□□□ -0.07
RIPK3-201ENST00000216274 PYM1Q9BRP8 204 aaKnown RBP14.61□□□□□ -0.07
RIPK3-201ENST00000216274 SERTAD1Q9UHV2 236 aa14.61□□□□□ -0.07
RIPK3-201ENST00000216274 MAD2L2Q9UI95 211 aa14.61□□□□□ -0.07
RIPK3-201ENST00000216274 PYCARDQ9ULZ3 195 aa14.61□□□□□ -0.07
RIPK3-201ENST00000216274 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
RIPK3-201ENST00000216274 R3HCC1Q9Y3T6 440 aaKnown RBP14.61□□□□□ -0.07
RIPK3-201ENST00000216274 SHTN1A0MZ66 631 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 HIRAP54198 1017 aaPredicted RBP14.6□□□□□ -0.07
RIPK3-201ENST00000216274 MYL5Q02045 173 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 GRIN1Q05586 938 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 EARS2Q5JPH6 523 aaKnown RBP14.6□□□□□ -0.07
RIPK3-201ENST00000216274 BLIDQ8IZY5 108 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 CERS5Q8N5B7 392 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 SLC44A5Q8NCS7 719 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 IMPACTQ9P2X3 320 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 PCDHA4Q9UN74 947 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 DAGLAQ9Y4D2 1042 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 PCDHA5Q9Y5H7 936 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 PALM3A6NDB9 673 aaPredicted RBP14.6□□□□□ -0.07
RIPK3-201ENST00000216274 SMC2O95347 1197 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 TOP1P11387 765 aaKnown RBP14.6□□□□□ -0.07
RIPK3-201ENST00000216274 GSDMDP57764 484 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 ATP2C1P98194 919 aaPredicted RBP14.6□□□□□ -0.07
RIPK3-201ENST00000216274 ZNF174Q15697 407 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 NT5DC1Q5TFE4 455 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 SAMD7Q7Z3H4 446 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 DAGLBQ8NCG7 672 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 SMARCE1Q969G3 411 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 MYOZ2Q9NPC6 264 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 NRBP1Q9UHY1 535 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 STX8Q9UNK0 236 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 MYH1P12882 1939 aa14.6□□□□□ -0.07
RIPK3-201ENST00000216274 FOCADQ5VW36 1801 aa14.59□□□□□ -0.07
RIPK3-201ENST00000216274 CBFA2T2O43439 604 aa14.59□□□□□ -0.07
RIPK3-201ENST00000216274 ACTN4O43707 911 aaKnown RBP14.59□□□□□ -0.07
RIPK3-201ENST00000216274 ITGBL1O95965 494 aaPredicted RBP14.59□□□□□ -0.07
RIPK3-201ENST00000216274 NCAPHQ15003 741 aa14.59□□□□□ -0.07
RIPK3-201ENST00000216274 TBC1D10BQ4KMP7 808 aaPredicted RBP14.59□□□□□ -0.07
RIPK3-201ENST00000216274 MXD3Q9BW11 206 aa14.59□□□□□ -0.07
RIPK3-201ENST00000216274 SPZ1Q9BXG8 430 aa14.59□□□□□ -0.07
RIPK3-201ENST00000216274 PASKQ96RG2 1323 aa14.59□□□□□ -0.07
RIPK3-201ENST00000216274 PLIN4Q96Q06 1357 aa14.59□□□□□ -0.07
RIPK3-201ENST00000216274 SMARCA1P28370 1054 aa14.58□□□□□ -0.07
RIPK3-201ENST00000216274 APLP1P51693 650 aa14.58□□□□□ -0.07
RIPK3-201ENST00000216274 PIK3AP1Q6ZUJ8 805 aa14.58□□□□□ -0.07
RIPK3-201ENST00000216274 KIAA0825Q8IV33 1275 aa14.58□□□□□ -0.07
RIPK3-201ENST00000216274 STAG2Q8N3U4 1231 aa14.58□□□□□ -0.07
RIPK3-201ENST00000216274 MLKLQ8NB16 471 aa14.58□□□□□ -0.07
RIPK3-201ENST00000216274 MTMR14Q8NCE2 650 aa14.58□□□□□ -0.07
RIPK3-201ENST00000216274 CCDC12Q8WUD4 166 aaPredicted RBP14.58□□□□□ -0.07
RIPK3-201ENST00000216274 MAN1B1Q9UKM7 699 aa14.58□□□□□ -0.07
RIPK3-201ENST00000216274 PITPNM2Q9BZ72 1349 aa14.58□□□□□ -0.08
RIPK3-201ENST00000216274 TRPM7Q96QT4 1865 aa14.58□□□□□ -0.08
RIPK3-201ENST00000216274 EGFRP00533 1210 aa14.58□□□□□ -0.08
RIPK3-201ENST00000216274 PARP1P09874 1014 aaKnown RBP14.58□□□□□ -0.08
RIPK3-201ENST00000216274 NOVP48745 357 aa14.58□□□□□ -0.08
RIPK3-201ENST00000216274 PTGDRQ13258 359 aa14.58□□□□□ -0.08
RIPK3-201ENST00000216274 CCDC144BQ3MJ40 725 aa14.58□□□□□ -0.08
RIPK3-201ENST00000216274 CT47A1Q5JQC4 288 aaPredicted RBP14.58□□□□□ -0.08
RIPK3-201ENST00000216274 MAP1SQ66K74 1059 aaPredicted RBP14.58□□□□□ -0.08
RIPK3-201ENST00000216274 ISM2Q6H9L7 571 aa14.58□□□□□ -0.08
RIPK3-201ENST00000216274 POLR2AP24928 1970 aaKnown RBP14.57□□□□□ -0.08
RIPK3-201ENST00000216274 SLFN14P0C7P3 912 aa14.57□□□□□ -0.08
RIPK3-201ENST00000216274 SARSP49591 514 aaKnown RBP14.57□□□□□ -0.08
RIPK3-201ENST00000216274 ARL6IP4Q66PJ3 421 aaKnown RBP14.57□□□□□ -0.08
RIPK3-201ENST00000216274 FOXP4Q8IVH2 680 aaPredicted RBP14.57□□□□□ -0.08
RIPK3-201ENST00000216274 SYMPKQ92797 1274 aaKnown RBP14.57□□□□□ -0.08
RIPK3-201ENST00000216274 DHX58Q96C10 678 aa14.57□□□□□ -0.08
RIPK3-201ENST00000216274 ZBED3Q96IU2 234 aaPredicted RBP14.57□□□□□ -0.08
RIPK3-201ENST00000216274 BARHL2Q9NY43 387 aa14.57□□□□□ -0.08
RIPK3-201ENST00000216274 IFNKQ9P0W0 207 aa14.57□□□□□ -0.08
RIPK3-201ENST00000216274 SWAP70Q9UH65 585 aa14.57□□□□□ -0.08
RIPK3-201ENST00000216274 CCDC194A0A1B0GVG4 234 aa14.56□□□□□ -0.08
RIPK3-201ENST00000216274 KLRF2D3W0D1 207 aa14.56□□□□□ -0.08
RIPK3-201ENST00000216274 HDLBPQ00341 1268 aaKnown RBP14.56□□□□□ -0.08
RIPK3-201ENST00000216274 FANCCQ00597 558 aa14.56□□□□□ -0.08
RIPK3-201ENST00000216274 MORC3Q14149 939 aa14.56□□□□□ -0.08
RIPK3-201ENST00000216274 WWC2Q6AWC2 1192 aa14.56□□□□□ -0.08
RIPK3-201ENST00000216274 HHIPL2Q6UWX4 724 aa14.56□□□□□ -0.08
RIPK3-201ENST00000216274 LRRC8AQ8IWT6 810 aa14.56□□□□□ -0.08
RIPK3-201ENST00000216274 C17orf53Q8N3J3 647 aaPredicted RBP14.56□□□□□ -0.08
RIPK3-201ENST00000216274 CCDC150Q8NCX0 1101 aa14.56□□□□□ -0.08
RIPK3-201ENST00000216274 CACTINQ8WUQ7 758 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms