RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 Anks1bQ8BIZ1 1259 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Hook3Q8BUK6 718 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cd248Q91V98 765 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Myl7Q9QVP4 175 aa10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 CoblQ5NBX1 1337 aaKnown RBP10.48□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ugt1a6bK9J7B2 531 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ugt1a6Q64435 531 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Dhx40Q6PE54 779 aaKnown RBP10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ugt1a7cQ6ZQM8 531 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tubb2aQ7TMM9 445 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Galnt17Q7TT15 598 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Depdc1bQ8BH88 529 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Riox2Q8CD15 465 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tubb2bQ9CWF2 445 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tmem191cQ9JJB1 302 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Gm13023A2A8N2 498 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Armc3A2AU72 881 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Mex3cQ05A36 652 aaKnown RBP10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Clec16aQ80U30 1036 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Sdad1Q80UZ2 687 aaKnown RBP10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cep85Q8BMK0 761 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ndufb9Q9CQJ8 179 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Smc1aQ9CU62 1233 aaKnown RBP10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tulp1Q9Z273 543 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Skor2A7M7C7 1008 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tsnaxip1Q99P25 704 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Akt1s1Q9D1F4 257 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Znf394Q9Z1D9 521 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Gm28510A0A087WP28 240 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Zfp42P22227 288 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Cetn1P41209 172 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Evi5P97366 809 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 MmeQ61391 750 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Fxr1Q61584 677 aaKnown RBP10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Krt87Q6IMF0 495 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Hirip3Q8BLH7 601 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Lrrc41Q8K1C9 807 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Adcy3Q8VHH7 1145 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Acsl3Q9CZW4 720 aaKnown RBP10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Fam217aQ9D9W6 419 aa10.47□□□□□ -0.73
Ldlr-202ENSMUST00000213114 DohhA0A1Y7VJ29 135 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Kcnb2A6H8H5 907 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tagap1P0CAX8 505 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Kctd1Q5M956 257 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Kiaa1211Q5PR69 1207 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ccdc157Q5SPX1 718 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Fgfr1opQ66JX5 399 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Ncoa7Q6DFV7 943 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Aggf1Q7TN31 711 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Iffo1Q8BXL9 562 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Tcp11l2Q8K1H7 517 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 Rnf123Q5XPI3 1314 aa10.46□□□□□ -0.73
Ldlr-202ENSMUST00000213114 AW822073A0A0N4SUK1 652 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Pramel3A2AHA7 463 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Gm7903A2AWL1 463 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 AV320801A2AWL3 467 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Slc39a2G3X943 309 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Gm15023L7MUB4 467 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Ap1b1O35643 943 aaKnown RBP10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Senp1P59110 640 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Cdr2P97817 455 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Scg2Q03517 617 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Slc9a1Q61165 820 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Krt14Q61781 484 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Q66JV7 365 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Epn1Q80VP1 575 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Slx1bQ8BX32 270 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Sept12Q9D451 317 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Eddm13E9Q7F5 164 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Alppl2P24823 529 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Adssl1P28650 457 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Cdc37Q61081 379 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Ctnna2Q61301 953 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Tmem59lQ7TNI2 337 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 ClasrpQ8CFC7 668 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Scyl2Q8CFE4 930 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Pym1Q8CHP5 203 aaKnown RBP10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Alg3Q8K2A8 438 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Ushbp1Q8R370 680 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Atp1a1Q8VDN2 1023 aaKnown RBP10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Kctd10Q922M3 315 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 CutaQ9CQ89 177 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Psma7Q9Z2U0 248 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Slit3Q9WVB4 1523 aa10.46□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Dnajc21E9Q8D0 531 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Pla2g4bP0C871 782 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Tnnc1P19123 161 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Snx25Q3ZT31 840 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Usp49Q6P9L4 685 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Strip1Q8C079 837 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Lin9Q8C735 542 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Lmbrd1Q8K0B2 537 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Asic2Q925H0 512 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Abca14E9Q8F8 1683 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Gna15P30678 374 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Map2k1P31938 393 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Pcif1P59114 706 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Glra4Q61603 456 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Znf532Q6NXK2 1036 aa10.45□□□□□ -0.74
Ldlr-202ENSMUST00000213114 Cdc23Q8BGZ4 597 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 24 ms