RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Tnni3kQ5GIG6 834 aa12.28□□□□□ -0.44
Lig3-210ENSMUST00000173347 Zkscan4Q5SZT6 480 aa12.28□□□□□ -0.44
Lig3-210ENSMUST00000173347 Ccdc172Q810N9 267 aa12.28□□□□□ -0.44
Lig3-210ENSMUST00000173347 AdpgkQ8VDL4 496 aa12.28□□□□□ -0.44
Lig3-210ENSMUST00000173347 Oxr1Q4KMM3 866 aa12.28□□□□□ -0.44
Lig3-210ENSMUST00000173347 Adgrg6Q6F3F9 1165 aa12.28□□□□□ -0.44
Lig3-210ENSMUST00000173347 Spire2Q8K1S6 718 aa12.28□□□□□ -0.44
Lig3-210ENSMUST00000173347 Krt82Q99M74 516 aa12.28□□□□□ -0.44
Lig3-210ENSMUST00000173347 Ly6iQ9WU67 134 aa12.28□□□□□ -0.44
Lig3-210ENSMUST00000173347 Gm5624F6ZZG8 207 aa12.27□□□□□ -0.44
Lig3-210ENSMUST00000173347 Klrk1O54709 232 aa12.27□□□□□ -0.44
Lig3-210ENSMUST00000173347 Cnga2Q62398 664 aa12.27□□□□□ -0.44
Lig3-210ENSMUST00000173347 Tjap1Q9DCD5 539 aa12.27□□□□□ -0.44
Lig3-210ENSMUST00000173347 Psmd1Q3TXS7 953 aa12.27□□□□□ -0.45
Lig3-210ENSMUST00000173347 PigsQ6PD26 555 aaKnown RBP12.27□□□□□ -0.45
Lig3-210ENSMUST00000173347 Ms4a5Q810P8 197 aa12.27□□□□□ -0.45
Lig3-210ENSMUST00000173347 Gpcpd1Q8C0L9 675 aa12.27□□□□□ -0.45
Lig3-210ENSMUST00000173347 Ints4Q8CIM8 964 aa12.27□□□□□ -0.45
Lig3-210ENSMUST00000173347 Sgpp1Q9JI99 430 aa12.27□□□□□ -0.45
Lig3-210ENSMUST00000173347 Mageb2A2AHM0 380 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Ano6Q6P9J9 911 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Rasgrp4Q8BTM9 673 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Pspc1Q8R326 523 aaKnown RBP12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Cul5Q9D5V5 780 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Xpo4Q9ESJ0 1151 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 VirmaA2AIV2 1811 aaKnown RBP12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Palm3A2TJV2 734 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Serpina16D3Z660 418 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Slc39a2G3X943 309 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Rasa2P58069 847 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Nbr1P97432 988 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Usp13Q5BKP2 858 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Akap4Q60662 849 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Cnnm4Q69ZF7 771 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Swap70Q6A028 585 aaKnown RBP12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Arl6ip4Q9JM93 229 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Gm7356A0A087WSA6 508 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Rasa3Q60790 834 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Gpbp1Q6NXH3 473 aaKnown RBP12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Tbc1d31Q6NXY1 996 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Fermt2Q8CIB5 680 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 GlyctkQ8QZY2 523 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Nrbp1Q99J45 535 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Mtmr9Q9Z2D0 545 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Myh14Q6URW6 2000 aa12.26□□□□□ -0.45
Lig3-210ENSMUST00000173347 Nr1i2O54915 431 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Madcam1Q61826 405 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Trex1Q91XB0 314 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Mmtag2Q99LX5 260 aaKnown RBP12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Myh7bA2AQP0 1941 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Pde4aO89084 844 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 LtbrP50284 415 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Nucb2P81117 420 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Dpf2Q61103 391 aaKnown RBP12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 RragbQ6NTA4 374 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Caps2Q8BUG5 550 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Onecut3Q8K557 490 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 E2f4Q8R0K9 410 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Cd274Q9EP73 290 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 ArcQ9WV31 396 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 CluhQ5SW19 1315 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Armc3A2AU72 881 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 GypcQ78HU7 95 aa12.25□□□□□ -0.45
Lig3-210ENSMUST00000173347 Cdc27A2A6Q5 825 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 D1Pas1P16381 660 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 CebpzP53569 1052 aaKnown RBP12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Vmn1r209Q5NC97 312 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Kcnf1Q7TSH7 493 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Col1a1P11087 1453 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Clrn2B2RVW2 232 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 CtshP49935 333 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Eif5P59325 429 aaKnown RBP12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Krt87Q6IMF0 495 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Mtss1lQ6P9S0 715 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Ptrh1Q8BW00 204 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Plcg2Q8CIH5 1265 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Fbxo18Q8K2I9 1042 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Kiaa1024Q8K3V7 917 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Dnaaf4Q8R368 420 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Gmcl1Q920G9 524 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Prkab1Q9R078 270 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Krt78E9Q0F0 1068 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 RdxP26043 583 aaKnown RBP12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Map3k9Q3U1V8 1077 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 D630036H23RikQ3UQD6 204 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Tshz1Q5DTH5 1084 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Ccdc189Q6NZQ0 333 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 B4galnt4Q766D5 1034 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 LdhdQ7TNG8 484 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Ccdc122Q8BVN0 290 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Snrnp35Q9D384 244 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 Pex3Q9QXY9 372 aa12.24□□□□□ -0.45
Lig3-210ENSMUST00000173347 LtkP08923 888 aa12.23□□□□□ -0.45
Lig3-210ENSMUST00000173347 Slc9c1Q6UJY2 1175 aa12.23□□□□□ -0.45
Lig3-210ENSMUST00000173347 Enox1Q8BHR2 643 aaKnown RBP12.23□□□□□ -0.45
Lig3-210ENSMUST00000173347 Kbtbd13Q8C828 458 aa12.23□□□□□ -0.45
Lig3-210ENSMUST00000173347 Inpp5bQ8K337 993 aa12.23□□□□□ -0.45
Lig3-210ENSMUST00000173347 Tesk2Q8VCT9 570 aa12.23□□□□□ -0.45
Lig3-210ENSMUST00000173347 Azi2Q9QYP6 405 aa12.23□□□□□ -0.45
Lig3-210ENSMUST00000173347 Mical3Q8CJ19 1993 aa12.23□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms