RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Onecut3Q8K557 490 aa11.1□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Cbx6Q9DBY5 414 aa11.1□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Prkab1Q9R078 270 aa11.1□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Krt78E9Q0F0 1068 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Gdf10P97737 476 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Tnni3kQ5GIG6 834 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Igf2bp2Q5SF07 592 aaKnown RBP11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Mboat7Q8CHK3 473 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 GlyctkQ8QZY2 523 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Kctd10Q922M3 315 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Tlcd1Q99JT6 247 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Saal1Q9D2C2 474 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 AllcQ9JHX6 414 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Ccnt1Q9QWV9 724 aaKnown RBP11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Peak1Q69Z38 1735 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Lrrc32G3XA59 663 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Psmd14O35593 310 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Klrk1O54709 232 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Pla2g4bP0C871 782 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Tbc1d31Q6NXY1 996 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Ccdc122Q8BVN0 290 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Spire2Q8K1S6 718 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Ppp2r5dQ91V89 594 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Hdac9Q99N13 588 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 EhhadhQ9DBM2 718 aa11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 Arfgef1G3X9K3 1846 aaKnown RBP11.09□□□□□ -0.63
Rnf41-202ENSMUST00000171342 PpardP35396 440 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Ccdc172Q810N9 267 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Cabp7Q91ZM8 215 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Gtf2a1Q99PM3 378 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Filip1Q9CS72 1211 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Scrn1Q9CZC8 414 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 DmtnQ9WV69 405 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Myh13B1AR69 1938 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Diaph1O08808 1255 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Ptgs1P22437 602 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Cdkn1cP49919 348 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Prr7Q3V0I2 269 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Ift88Q61371 824 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Yars2Q8BYL4 472 aaKnown RBP11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Pspc1Q8R326 523 aaKnown RBP11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 FAM186AQ9D9R9 1790 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 D1Pas1P16381 660 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Akap4Q60662 849 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 GypcQ78HU7 95 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Galnt17Q7TT15 598 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Dnaaf4Q8R368 420 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Snrnp35Q9D384 244 aa11.08□□□□□ -0.64
Rnf41-202ENSMUST00000171342 UncxO08934 530 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Sema3fO88632 785 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 CnpP16330 420 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Nf2P46662 596 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Lrrcc1Q69ZB0 1026 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Riox2Q8CD15 465 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Arhgef6Q8K4I3 771 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Trex1Q91XB0 314 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Mtfr1lQ9CWE0 289 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Nr1i2O54915 431 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Nek1P51954 1203 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 MyrflQ3UN70 904 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Tigd5Q499M4 642 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Insm1Q63ZV0 521 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Asic1Q6NXK8 526 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Ms4a5Q810P8 197 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Necab1Q8BG18 352 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Ccz1Q8C1Y8 480 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Cul5Q9D5V5 780 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Cfap45Q9D9U9 551 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Sertad1Q9JL10 236 aa11.07□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Znf568E9PYI1 671 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Aco1P28271 889 aaKnown RBP11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Sp4Q62445 782 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Fermt2Q8CIB5 680 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Lmbrd1Q8K0B2 537 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Pcdha12Q91Y18 950 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 2310002L09RikQ9D7L5 217 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Azi2Q9QYP6 405 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Dnajb6O54946 365 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Apbb1ipQ8R5A3 670 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Borcs6Q9D6W8 360 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Gm5114W4VSN8 858 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Dnaaf5B9EJR8 853 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Slc10a5Q5PT54 434 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Ccna1Q61456 421 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Tmem39bQ810L4 492 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Trub2Q91WG3 331 aaKnown RBP11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Ddx27Q921N6 760 aaKnown RBP11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Sorbs3Q9R1Z8 733 aa11.06□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Col5a2Q3U962 1497 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Mtcl1Q3UHU5 1945 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Prss51A0A286YDY8 319 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Lrrc36Q3V0M2 755 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Brip1Q5SXJ3 1174 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Krt87Q6IMF0 495 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Gm2163Q6PCY5 473 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Enox1Q8BHR2 643 aaKnown RBP11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Thap2Q9D305 217 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Btn2a2A4QPC6 514 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Rsbn1lD3Z0K6 821 aa11.05□□□□□ -0.64
Rnf41-202ENSMUST00000171342 Frat1P70339 274 aa11.05□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms