RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Plbd2Q3TCN2 594 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Morc2aQ69ZX6 1030 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 BaatQ91X34 420 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Cfap57Q9D180 1249 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Pex11aQ9Z211 246 aa12.87□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ap1m1P35585 423 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Rpl13P47963 211 aaKnown RBP12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 S100bP50114 92 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Znf667Q2TL60 609 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Adat2Q6P6J0 191 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Atp2b4Q6Q477 1205 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Nucks1Q80XU3 234 aaKnown RBP12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Kank3Q9Z1P7 791 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tuft1O08970 390 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Becn2P0DM65 447 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tdo2P48776 406 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Kifap3P70188 793 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tom1l1Q923U0 474 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 MesdQ9ERE7 224 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 RpgrQ9R0X5 1001 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 1700122O11RikJ3QPW6 241 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Sept7O55131 436 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 LdhaP06151 332 aaKnown RBP12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ccdc174Q3U155 467 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Gucy2cQ3UWA6 1072 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ncoa4Q5U4H9 625 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Trim21Q62191 470 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Krt12Q64291 487 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Stkld1Q80YS9 662 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Fam204aQ8C6C7 236 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Myom2Q14BI5 1463 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Znf335A2A5K6 1337 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Bpifb4A2BGH0 617 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Pcdhb9E9Q5G2 828 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Dnm2P39054 870 aaKnown RBP12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Znf830Q8R1N0 363 aaKnown RBP12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Thoc1Q8R3N6 657 aaKnown RBP12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Mis12Q9CY25 206 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 IcoslgQ9JHJ8 322 aa12.86□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Yeats2Q3TUF7 1407 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Cul7Q8VE73 1689 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Gm10110D3Z5M2 615 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Fam228bQ497Q6 232 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tas2r124Q7M718 309 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Atp6v0a2P15920 856 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Gpr182P43142 395 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Nlrp4cQ3TKR3 982 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Hirip3Q8BLH7 601 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Morc4Q8BMD7 928 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Vps37bQ8R0J7 285 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Kdm6aO70546 1401 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Llgl2Q3TJ91 1027 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Armc2Q3URY6 854 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Lsm14bQ8CGC4 385 aaKnown RBP12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Trim68Q8K243 485 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Popdc2Q9ES82 367 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Stk39Q9Z1W9 556 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Arhgef11Q68FM7 1552 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Rusc2Q80U22 1514 aa12.85□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Gm44503E9PYU5 387 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tcp1P11983 556 aaKnown RBP12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tmed1Q3V009 227 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Rnf207Q3V3A7 635 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Mum1l1Q4VA55 681 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 RbsnQ80Y56 783 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Dr1Q91WV0 176 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Synj2Q9D2G5 1434 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Nova2D3YVV7 556 aaKnown RBP12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Vmn2r23E9PXI5 849 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Ms4a2P20490 235 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Rfc1P35601 1131 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Prpf38aQ4FK66 312 aaKnown RBP12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Acbd5Q5XG73 508 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Kif1bpQ6ZPU9 617 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Wdr64Q9D565 1086 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Klc4Q9DBS5 619 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tcof1O08784 1320 aaKnown RBP12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Eps15P42567 897 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tom1l2Q5SRX1 507 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tbc1d1Q60949 1255 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Tshz2Q68FE9 1030 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Cyp2d12Q8BVD2 504 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Adgrl3Q80TS3 1537 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Pprc1Q6NZN1 1644 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Svs3aF2Z472 265 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Pagr1bF6V0H0 108 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Gm6121L7MUF1 212 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Caprin2Q05A80 1031 aaKnown RBP12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 NeblQ0II04 452 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Nr1d1Q3UV55 615 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Zbtb17Q60821 794 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Clec16aQ80U30 1036 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Eaf2Q91ZD6 262 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Wbp11Q923D5 641 aaKnown RBP12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Pagr1aQ99L02 253 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Abcf2Q99LE6 628 aaKnown RBP12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 MbipQ99LQ1 341 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Stag1Q9D3E6 1258 aa12.84□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Krt24A1L317 512 aa12.83□□□□□ -0.35
Ndc1-204ENSMUST00000139560 Vsnl1P62761 191 aa12.83□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms