RNA–Protein interactions for RNA: ENSMUST00000100497.10

Actb-201, Transcript of Actin, cytoplasmic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Actb, Length 1,920 nt, Biotype protein coding, Subcellular localisation Axon, Cell leading edge, Cytoplasm, Cytosol, Dendrite, Endoplasmic reticulum, Exosome, Growth cone, Lamellipodium, Perinuclear, Ribosome, Somatodendritic compartment .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Actb-201ENSMUST00000100497 TicrrQ8BQ33 1889 aa13.84□□□□□ -0.19
Actb-201ENSMUST00000100497 Pabpc1lA2A5N3 607 aaKnown RBP13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Cdc27A2A6Q5 825 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Gm10134F6ZQC6 126 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Dok7Q18PE0 504 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Pnma5Q5DTT8 618 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Bag1Q60739 355 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Cnga2Q62398 664 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Tm4sf1Q64302 202 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Krt39Q6IFX4 482 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Dusp9Q7TNL7 452 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Clic6Q8BHB9 596 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Ushbp1Q8R370 680 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Krt79Q8VED5 531 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Mmtag2Q99LX5 260 aaKnown RBP13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 SelenooQ9DBC0 667 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Mtmr9Q9Z2D0 545 aa13.83□□□□□ -0.2
Actb-201ENSMUST00000100497 Pitpnm2Q6ZPQ6 1335 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Surf1P09925 306 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Gjb4Q02738 266 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Adgrg6Q6F3F9 1165 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Gpbp1Q6NXH3 473 aaKnown RBP13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Camsap3Q80VC9 1252 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Dlg1Q811D0 905 aaKnown RBP13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Riox2Q8CD15 465 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Phldb2Q8K1N2 1249 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 GlyctkQ8QZY2 523 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Myoz2Q9JJW5 264 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 GsdmeQ9Z2D3 512 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Gm30191A0A0U1RNT7 187 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Gm5134E9QAB5 671 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Msh3P13705 1091 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Nr5a1P33242 462 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Mdh1bQ5F204 500 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Nab2Q61127 525 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Glra4Q61603 456 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Tmc4Q7TQ65 694 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 PaoxQ8C0L6 504 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Kctd10Q922M3 315 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Gnl2Q99LH1 728 aaKnown RBP13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Krt82Q99M74 516 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 ArcQ9WV31 396 aa13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 AdnpQ9Z103 1108 aaKnown RBP13.82□□□□□ -0.2
Actb-201ENSMUST00000100497 Ulk4Q3V129 1303 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Map7d1A2AJI0 846 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Vcam1P29533 739 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Prom2Q3UUY6 835 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Tigd5Q499M4 642 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 CrkQ64010 304 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Haus6Q6NV99 933 aaKnown RBP13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Txndc16Q7TN22 820 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Dpp8Q80YA7 892 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Arid5bQ8BM75 1188 aaKnown RBP13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Dnm3Q8BZ98 863 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Rab3il1Q8VDV3 383 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Cabp7Q91ZM8 215 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Mtfr1lQ9CWE0 289 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Galntl5Q9D4M9 431 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Cul5Q9D5V5 780 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Nap1l5Q9JJF0 156 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Itga2bQ9QUM0 1033 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Homer1Q9Z2Y3 366 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Mtcl1Q3UHU5 1945 aa13.81□□□□□ -0.2
Actb-201ENSMUST00000100497 Krt78E9Q0F0 1068 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Mboat4P0C7A3 435 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Slurp2P0DP59 97 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Wnt7aP24383 349 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Cdc25aP48964 514 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Gdf10P97737 476 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Spata18Q0P557 537 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Gpatch11Q3UFS4 262 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Taf3Q5HZG4 932 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Fam161bQ8CB59 589 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Ifih1Q8R5F7 1025 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Pcdha12Q91Y18 950 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Snrnp35Q9D384 244 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Lonrf3Q9D4H7 753 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Fxr2Q9WVR4 673 aaKnown RBP13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Uso1Q9Z1Z0 959 aaKnown RBP13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 LtbrP50284 415 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Npr3P70180 536 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Tnni3kQ5GIG6 834 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Krt87Q6IMF0 495 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Mtss1lQ6P9S0 715 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 PodnQ7TQ62 611 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Sdccag8Q80UF4 717 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Gga3Q8BMI3 718 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Mtmr6Q8VE11 617 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Sept14Q9DA97 430 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Magi2Q9WVQ1 1275 aa13.8□□□□□ -0.2
Actb-201ENSMUST00000100497 Plxnb2B2RXS4 1842 aa13.79□□□□□ -0.2
Actb-201ENSMUST00000100497 Cfap70D3YVL2 1141 aa13.79□□□□□ -0.2
Actb-201ENSMUST00000100497 Sox5P35710 763 aa13.79□□□□□ -0.2
Actb-201ENSMUST00000100497 Sept2P42208 361 aaKnown RBP13.79□□□□□ -0.2
Actb-201ENSMUST00000100497 Frat1P70339 274 aa13.79□□□□□ -0.2
Actb-201ENSMUST00000100497 SpidrQ8BGX7 933 aa13.79□□□□□ -0.2
Actb-201ENSMUST00000100497 Drd5Q8BLD9 478 aa13.79□□□□□ -0.2
Actb-201ENSMUST00000100497 Etf1Q8BWY3 437 aaKnown RBP13.79□□□□□ -0.2
Actb-201ENSMUST00000100497 Rbm19Q8R3C6 952 aaKnown RBP13.79□□□□□ -0.2
Actb-201ENSMUST00000100497 Eps8l1Q8R5F8 716 aa13.79□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms