RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Exoc5Q3TPX4 708 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ift20Q61025 132 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ddx3yQ62095 658 aaKnown RBP12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Mtss1lQ6P9S0 715 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Arhgef28P97433 1693 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Parp1P11103 1013 aaKnown RBP12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Kiaa1211Q5PR69 1207 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cep70Q6IQY5 616 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Rint1Q8BZ36 792 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tmx4Q8C0L0 335 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Q8C5C9 218 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Pus7lQ8CE46 702 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Myl6bQ8CI43 207 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Spata2Q8K004 515 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gimap7Q8R379 293 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 EpgnQ924X1 152 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 CpdO89001 1377 aa12.58□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Usp15Q8R5H1 981 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Zkscan3Q91VW9 553 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 CutaQ9CQ89 177 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Prpf40aQ9R1C7 953 aaKnown RBP12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Psma7Q9Z2U0 248 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Xrcc6P23475 608 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tcerg1lQ3B807 590 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ddx10Q80Y44 875 aaKnown RBP12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Calml3Q9D6P8 149 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tacc2Q9JJG0 1149 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Itga2bQ9QUM0 1033 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Abcb4P21440 1276 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ctnnd1P30999 938 aaKnown RBP12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Wee1P47810 646 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tmod1P49813 359 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ccdc33Q3ULW6 985 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Rassf6Q80UQ2 353 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Efcab14Q8BGQ6 484 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Maip1Q8BHE8 291 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Zfp174B9EJW5 407 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cacna2d1O08532 1103 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Snx12O70493 165 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cdh15P33146 784 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gnat2P50149 354 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Q32P12 615 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Clul1Q3ZRW6 464 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tsg101Q61187 391 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Slitrk3Q810B9 980 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tmem63cQ8CBX0 802 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tube1Q9D6T1 475 aa12.57□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Slc39a2G3X943 309 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 AK157302I3ITR1 129 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Pde6bP23440 856 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Trip13Q3UA06 432 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Sco1Q5SUC9 284 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Alx1Q8C8B0 326 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Isca1Q9D924 129 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Zfp213E9QAW0 468 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gas8Q60779 478 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Hook2Q7TMK6 716 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Slc51bQ80WK2 128 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Haus1Q8BHX1 278 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 CgasQ8C6L5 507 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Qser1A2BIE1 1698 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Eef2P58252 858 aaKnown RBP12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Fam83bQ0VBM2 1012 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Nr1d1Q3UV55 615 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Trim52Q8CDV4 233 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 AdpgkQ8VDL4 496 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 HgsQ99LI8 775 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Smtnl1Q99LM3 459 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tmem39aQ9CYC3 486 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Lman1Q9D0F3 517 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Fut8Q9WTS2 575 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Krt78E9Q0F0 1068 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Sept1P42209 366 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Snrpa1P57784 255 aaKnown RBP12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 ErmnQ5EBJ4 281 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 HrQ61645 1182 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Dclk3Q8BWQ5 790 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cabp7Q91ZM8 215 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Fam133bQ9CVI2 245 aaKnown RBP12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Saal1Q9D2C2 474 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Atp10bB1AWN4 1474 aa12.56□□□□□ -0.4
Topbp1-201ENSMUST00000035164 MeiocA2AG06 965 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Serpinb6dQ3UWK8 375 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Cep131Q62036 1060 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Smarca1Q6PGB8 1046 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Pak2Q8CIN4 524 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Hps5P59438 1126 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Rapgef1Q3UHC1 1224 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 ItgadQ3V0T4 1168 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Kif1bpQ6ZPU9 617 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Bbs9Q811G0 885 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Acsl3Q9CZW4 720 aaKnown RBP12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Mipol1Q9D9F8 279 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Gpaa1Q9WTK3 621 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Apol6B7ZC55 329 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Prl2c3P04768 224 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Tcp1P11983 556 aaKnown RBP12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Ctnna1P26231 906 aaKnown RBP12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 Nr5a1P33242 462 aa12.55□□□□□ -0.4
Topbp1-201ENSMUST00000035164 FliiQ9JJ28 1271 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 17.5 ms