RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 CntrobQ8CB62 887 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Slc26a7Q8R2Z3 656 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Dbndd1Q9CZ00 160 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Rabgef1Q9JM13 491 aa18.38■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Iqca1lA6H690 825 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Hspd1P63038 573 aaKnown RBP18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Tmem60Q8K174 133 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Hdac9Q99N13 588 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Gucy1b3O54865 620 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Pde6bP23440 856 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Tmem119Q8R138 280 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Slc35f6Q8VE96 372 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Setbp1Q9Z180 1582 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Palb2Q3U0P1 1104 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Champ1Q8K327 802 aaKnown RBP18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Uba5Q8VE47 403 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Tfcp2Q9ERA0 502 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Kif9Q9WV04 790 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Ttll7A4Q9F0 912 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 PpardP35396 440 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 ArsiQ32KI9 573 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Arhgap30Q640N3 1101 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Slc4a8Q8JZR6 1089 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Arl8aQ8VEH3 186 aa18.37■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Hspa2P17156 633 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Gna11P21278 359 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Lrrc43Q3V0L5 667 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Pnma3Q8JZW8 466 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Mylk2Q8VCR8 613 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 AceP09470 1312 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Arl13bQ640N2 427 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Prl3d1P18121 224 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Rapgef1Q3UHC1 1224 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 DbnlQ62418 436 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 AdarQ99MU3 1178 aaKnown RBP18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 CactinQ9CS00 772 aaKnown RBP18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Ccdc124Q9D8X2 217 aaKnown RBP18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Atp10aO54827 1508 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Dnajc3Q91YW3 504 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Rims1Q99NE5 1463 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Pcyt1aP49586 367 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Pfkfb1P70266 471 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Ccdc138Q0VF22 680 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Arhgef2Q60875 985 aa18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Wbp11Q923D5 641 aaKnown RBP18.36■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Sh3tc1G3X9F6 1346 aa18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Med14A2ABV5 1459 aaKnown RBP18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Klhl41A2AUC9 606 aa18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Tubgcp2Q921G8 905 aa18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Kcnk16G5E845 292 aa18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 PhexP70669 749 aa18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Ppfia2Q8BSS9 1257 aa18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Pcdhgc5Q91XW9 944 aa18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 PdhbQ9D051 359 aa18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Tmem165P52875 323 aa18.35■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Depdc1bQ8BH88 529 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Hmgb2P30681 210 aaKnown RBP18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 NfkbibQ60778 359 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 MyripQ8K3I4 856 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Fam217aQ9D9W6 419 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Slc13a1Q9JHI4 594 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Col1a2Q01149 1372 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Retreg2Q6NS82 541 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 SpopQ6ZWS8 374 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Mettl5Q8K1A0 209 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Asic2Q925H0 512 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Psma8Q9CWH6 250 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Cyp2ab1S4R196 498 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Dnmt1P13864 1620 aaKnown RBP18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Pcdha7Q91Y13 937 aa18.34■□□□□ 0.53
Col17a1-201ENSMUST00000026045 HpdP49429 393 aa18.33■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Satb2Q8VI24 733 aa18.33■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Chchd3Q9CRB9 227 aaKnown RBP18.33■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Faf1P54731 649 aa18.33■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Ect2Q07139 913 aa18.33■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Zfp781Q0P5U5 243 aa18.33■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Nup58Q8R332 587 aa18.33■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Klhl20Q8VCK5 604 aa18.33■□□□□ 0.53
Col17a1-201ENSMUST00000026045 PtprtQ99M80 1454 aa18.33■□□□□ 0.53
Col17a1-201ENSMUST00000026045 Apol8A2VDH7 339 aaKnown RBP18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Tbc1d2B1AVH7 922 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Sec24cG3X972 1096 aaKnown RBP18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 MthfslL7N466 203 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Cyp26a1O55127 497 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Kif6E9PX57 802 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Xrcc6P23475 608 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Serpinb6Q60854 378 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Kif1bpQ6ZPU9 617 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Nkiras1Q8CEC5 192 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Lcmt1A0A0U1RNF2 332 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 1700029H14RikE9PY36 240 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Flot1O08917 428 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Ccdc92bQ5SUE3 299 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Apol10aQ8CCA5 318 aa18.33■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Zc4h2Q68FG0 224 aa18.32■□□□□ 0.52
Col17a1-201ENSMUST00000026045 HltfQ6PCN7 1003 aa18.32■□□□□ 0.52
Col17a1-201ENSMUST00000026045 NelfbQ8C4Y3 580 aa18.32■□□□□ 0.52
Col17a1-201ENSMUST00000026045 AdpgkQ8VDL4 496 aa18.32■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Txndc9Q9CQ79 226 aa18.32■□□□□ 0.52
Col17a1-201ENSMUST00000026045 Nova2D3YVV7 556 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms