RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Ildr1Q8CBR1 537 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Mtmr9Q9Z2D0 545 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Ubr3Q5U430 1889 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Pcdh11xF6ZNL5 1338 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Kcna1P16388 495 aa27.91■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Traf1P39428 409 aa27.91■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 TbcbQ9D1E6 244 aa27.91■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Desi2Q9D291 194 aa27.91■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Sel1lQ9Z2G6 790 aa27.91■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Fam178bQ24JP3 464 aa27.91■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Best3Q6H1V1 669 aa27.91■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Tube1Q9D6T1 475 aa27.91■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Rsph10bE9PYQ0 876 aa27.9■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Tmem132bF7BAB2 1078 aa27.9■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Stim1P70302 685 aa27.9■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Tada3Q8R0L9 432 aa27.9■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 4930548H24RikQ9D496 437 aa27.9■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Pabpc1lA2A5N3 607 aaKnown RBP27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Armc3A2AU72 881 aa27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Kif23E9Q5G3 953 aa27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 GalcP54818 684 aa27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Lrrfip1Q3UZ39 729 aaKnown RBP27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Txndc16Q7TN22 820 aa27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Ushbp1Q8R370 680 aa27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Akap8Q9DBR0 687 aaKnown RBP27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Pex3Q9QXY9 372 aa27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Myh8P13542 1937 aa27.89■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Slc39a2G3X943 309 aa27.89■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Sema6bO54951 886 aa27.89■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Psg29Q3URN6 468 aa27.89■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Iqcb1Q8BP00 598 aa27.89■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Q8C5C9 218 aa27.89■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Cdan1Q8CC12 1239 aa27.89■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 SltmQ8CH25 1031 aaKnown RBP27.89■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Trmt112Q9DCG9 125 aa27.89■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Togaram1Q6A070 1776 aaKnown RBP27.88■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Ltbp2O08999 1813 aa27.88■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Slurp2P0DP59 97 aa27.88■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 DaglaQ6WQJ1 1044 aa27.88■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Arhgef6Q8K4I3 771 aa27.88■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Ecm29Q6PDI5 1840 aa27.88■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Mboat4P0C7A3 435 aa27.88■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Setdb2Q8C267 713 aa27.88■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Mical1Q8VDP3 1048 aa27.88■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Grem2O88273 168 aa27.87■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Hmgb2P30681 210 aaKnown RBP27.87■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Pla2g4eQ50L42 875 aa27.87■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 ParnQ8VDG3 624 aa27.87■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Chaf1aQ9QWF0 911 aa27.87■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Prdm11A2AGX3 565 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Krt18P05784 423 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Rad23aP54726 363 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Trim25Q61510 634 aaKnown RBP27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Mtss1lQ6P9S0 715 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Prpf40bQ80W14 870 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Tcp11l2Q8K1H7 517 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Cabp7Q91ZM8 215 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Snrnp35Q9D384 244 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Egfl6Q9JJZ5 550 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 AmfrQ9R049 643 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Hspa4Q61316 841 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Tmem63cQ8CBX0 802 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Pkd2l2Q9JLG4 621 aa27.86■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Bpifb4A2BGH0 617 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Zfand4D3Z3C6 739 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Glg1Q61543 1175 aaKnown RBP27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Ncoa7Q6DFV7 943 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Ano2Q8CFW1 1002 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Tomm22Q9CPQ3 142 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Efhd1Q9D4J1 240 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Gm5114W4VSN8 858 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Cntnap1O54991 1385 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Gm5934D3Z4U6 212 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Ccna1Q61456 421 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Ankrd13aQ80UP5 588 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Krt82Q99M74 516 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Syce1Q9D495 329 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Homer1Q9Z2Y3 366 aa27.85■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 GlyctkQ8QZY2 523 aa27.84■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Tmem134Q8R0J4 195 aa27.84■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Xrcc4Q924T3 326 aa27.84■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Jag1Q9QXX0 1218 aa27.84■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Nup188Q6ZQH8 1759 aa27.84■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Gm4307E9PZY4 289 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Gm4312K9J7E2 289 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Pip4k2aO70172 405 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Msh3P13705 1091 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 LarsQ8BMJ2 1178 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Rassf4Q8CB96 322 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Mboat7Q8CHK3 473 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Ccdc12Q8R344 166 aaKnown RBP27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Gm5580A0A0N4SVP8 411 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Tnni3kQ5GIG6 834 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Igbp1Q61249 340 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Kdm1aQ6ZQ88 853 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Tubb2aQ7TMM9 445 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Trub2Q91WG3 331 aaKnown RBP27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Tubb2bQ9CWF2 445 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Arpp21Q9DCB4 807 aa27.83■■■□□ 2.05
Cldnd1-201ENSMUST00000023426 Gdf11Q9Z1W4 405 aa27.83■■■□□ 2.05
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms