RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Fam228aQ8CDW1 299 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Dis3l2Q8CI75 870 aaKnown RBP11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Cst12Q9DAN8 128 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Psma7Q9Z2U0 248 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Med23Q80YQ2 1367 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Cyp26a1O55127 497 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Syne3Q4FZC9 975 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Nek9Q8K1R7 984 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Cd2bp2Q9CWK3 342 aaKnown RBP11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Mrps25Q9D125 171 aaKnown RBP11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Becn2P0DM65 447 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 YwhaeP62259 255 aaKnown RBP11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Prdm1Q60636 856 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Sp4Q62445 782 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Slc7a6osQ7TPE5 306 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Anks1bQ8BIZ1 1259 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 NelfbQ8C4Y3 580 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Mfap3Q922T2 349 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Med10Q9CXU0 135 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 MthfslL7N466 203 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Lnx1O70263 728 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Card10P58660 1021 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Lrriq3Q14DL3 633 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 GopcQ8BH60 463 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ankk1Q8BZ25 745 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Klhl20Q8VCK5 604 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ppp2r3dQ9Z176 491 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 A0A1W2P7S8 802 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Prl3d1P18121 224 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Pdrg1P59048 133 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Iqsec3Q3TES0 1195 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Cdc5lQ6A068 802 aaKnown RBP11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Krit1Q6S5J6 736 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Arid5bQ8BM75 1188 aaKnown RBP11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Apol10aQ8CCA5 318 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 HscbQ8K3A0 234 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Znf830Q8R1N0 363 aaKnown RBP11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ccdc92Q8VDN4 314 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Synpo2Q91YE8 1087 aaKnown RBP11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Smc6Q924W5 1097 aa11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 RtcbQ99LF4 505 aaKnown RBP11.88□□□□□ -0.51
Ciita-201ENSMUST00000023147 Rnf40Q3U319 1001 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Pla2g4fQ50L41 855 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Krt39Q6IFX4 482 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Pja2Q80U04 707 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Cdk5rap3Q99LM2 503 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 1700013H16RikQ9DAC5 291 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Bpifb4A2BGH0 617 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Tuft1O08970 390 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Tcp1P11983 556 aaKnown RBP11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Jarid2Q62315 1234 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Nlrp9aQ66X03 949 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Trim7Q923T7 510 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Nxf1Q99JX7 618 aaKnown RBP11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ppil4Q9CXG3 492 aaKnown RBP11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Dusp10Q9ESS0 483 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Pard3Q99NH2 1333 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Sox13Q04891 613 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Gngt1Q61012 74 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Dnajc8Q6NZB0 253 aaKnown RBP11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Dhx38Q80X98 1228 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 4930504O13RikQ8C5Z9 145 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Osbpl1aQ91XL9 950 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Gm1661E9Q963 441 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Stk10O55098 966 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Atp6v1e1P50518 226 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ppp1r1bQ60829 194 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Msl1Q6PDM1 616 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Arhgap10Q6Y5D8 786 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Igsf3Q6ZQA6 1194 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Asap2Q7SIG6 958 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Stx17Q9D0I4 301 aa11.87□□□□□ -0.51
Ciita-201ENSMUST00000023147 Surf1P09925 306 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Asic2Q925H0 512 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Stxbp3Q60770 592 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Wdr19Q3UGF1 1341 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Adcy9P51830 1353 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Gm6583E9Q8Z1 469 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 IntuQ059U7 942 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Zbtb40Q6PCS8 1258 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Svs3bQ8BZH8 265 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Rcan1Q9JHG6 198 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Azi2Q9QYP6 405 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Irs4Q9Z0Y7 1216 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Lcmt1A0A0U1RNF2 332 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Lrrc74aA0A1Y7VMD6 494 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Nbr1P97432 988 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Micall2Q3TN34 1009 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Pls1Q3V0K9 630 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Lrrc36Q3V0M2 755 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 SarnpQ9D1J3 210 aaKnown RBP11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 Myo1cQ9WTI7 1063 aa11.86□□□□□ -0.51
Ciita-201ENSMUST00000023147 ChkbO55229 394 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Gucy2eP52785 1108 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 MpndQ3TV65 487 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ddb1Q3U1J4 1140 aaKnown RBP11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Fam170aQ66LM6 333 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Q8CEZ4 452 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Ppfia4B8QI36 1187 aa11.85□□□□□ -0.51
Ciita-201ENSMUST00000023147 Cd72P21855 354 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 16.3 ms