RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Parp1P11103 1013 aaKnown RBP11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Zfp781Q0P5U5 243 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Sec31aQ3UPL0 1230 aaKnown RBP11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Tsr1Q5SWD9 803 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Il17raQ60943 864 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Ncapg2Q6DFV1 1138 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Adam6bQ6IMH7 756 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Vps37cQ8R105 352 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Eps8l2Q99K30 729 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 RabggtaQ9JHK4 567 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Slc12a2P55012 1205 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Hdhd2Q3UGR5 259 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Ccdc42Q5SV66 316 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 GypcQ78HU7 95 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Erlin1Q91X78 346 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Ccdc43Q9CR29 222 aaKnown RBP11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 SetQ9EQU5 289 aaKnown RBP11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Speer4aF8VPX6 267 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Prl2c3P04768 224 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 RaraP11416 462 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Usp5P56399 858 aaKnown RBP11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Sec23aQ01405 765 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Fxr1Q61584 677 aaKnown RBP11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Dydc1Q9D9T0 175 aa11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Orc1Q9Z1N2 840 aaKnown RBP11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Knop1Q9Z2Q2 478 aaKnown RBP11.53□□□□□ -0.56
Clip3-201ENSMUST00000014065 Krt78E9Q0F0 1068 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 Scgb2b19J3QM75 112 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 GabrdP22933 449 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 Pde4dQ01063 747 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 DSCC1Q14AI0 399 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 Tbc1d2bQ3U0J8 965 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 Mars2Q499X9 586 aaKnown RBP11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 Adck2Q6NSR3 617 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 Hdac4Q6NZM9 1076 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 DlatQ8BMF4 642 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 Myl6bQ8CI43 207 aa11.52□□□□□ -0.56
Clip3-201ENSMUST00000014065 Tjp1P39447 1745 aaKnown RBP11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Ulk4Q3V129 1303 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Stag2O35638 1231 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Ighmbp2P40694 993 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Siah1aP61092 282 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 ItgadQ3V0T4 1168 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Znf697Q569E7 569 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Zc3h12cQ5DTV4 884 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Slc39a11Q8BWY7 342 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 RarsQ9D0I9 660 aaKnown RBP11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 CluhQ5SW19 1315 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Gm1993A6X8I0 212 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 SlxD3Z347 212 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Calm1P0DP26 149 aaKnown RBP11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Calm2P0DP27 149 aaKnown RBP11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Calm3P0DP28 149 aaKnown RBP11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Tubb4bP68372 445 aaKnown RBP11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Mtss1lQ6P9S0 715 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Aggf1Q7TN31 711 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Q91WD4 421 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 CutaQ9CQ89 177 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Ribc1Q9D0B8 379 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Fut8Q9WTS2 575 aa11.52□□□□□ -0.57
Clip3-201ENSMUST00000014065 Slc9a1Q61165 820 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 RragaQ80X95 313 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Epha10Q8BYG9 1007 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Tmem60Q8K174 133 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Osbpl1aQ91XL9 950 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Rnf34Q99KR6 376 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Dynll2Q9D0M5 89 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Ank1Q02357 1862 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 NeblQ0II04 452 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Hdgfl1Q2VPR5 283 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Ddx3yQ62095 658 aaKnown RBP11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Trim6Q8BGE7 488 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Ubxn1Q922Y1 297 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Cd274Q9EP73 290 aa11.51□□□□□ -0.57
Clip3-201ENSMUST00000014065 Akap2O54931 893 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Pip4k2aO70172 405 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Mx1P09922 631 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 March6Q6ZQ89 909 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Kctd3Q8BFX3 815 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Tmem134Q8R0J4 195 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Stx17Q9D0I4 301 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Znf704Q9ERQ3 566 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Tuft1O08970 390 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Tubb5P99024 444 aaKnown RBP11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Atp8b1Q148W0 1251 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Exoc5Q3TPX4 708 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Wdr70Q3TWF6 657 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Kctd19Q562E2 927 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 NntQ61941 1086 aaKnown RBP11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Antxr2Q6DFX2 487 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 E2f4Q8R0K9 410 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 ZgpatQ8VDM1 511 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 EpgnQ924X1 152 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 KynuQ9CXF0 464 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Galntl5Q9D4M9 431 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Sf3a3Q9D554 501 aaKnown RBP11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Cxcl11Q9JHH5 100 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Pkd2l2Q9JLG4 621 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Nr2e3Q9QXZ7 395 aa11.5□□□□□ -0.57
Clip3-201ENSMUST00000014065 Ubxn8Q9QZ49 277 aa11.5□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms