RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C VMA13P41807 478 aaKnown RBP8.6□□□□□ -1.03
RPD3YNL330C AGP3P43548 558 aa8.6□□□□□ -1.03
RPD3YNL330C DLD2P46681 530 aaKnown RBP8.6□□□□□ -1.03
RPD3YNL330C SNG1P46950 547 aa8.6□□□□□ -1.03
RPD3YNL330C GCD14P46959 383 aaPredicted RBP8.6□□□□□ -1.03
RPD3YNL330C DIA3P52290 468 aa8.6□□□□□ -1.03
RPD3YNL330C PET117Q02771 107 aa8.6□□□□□ -1.03
RPD3YNL330C SRL4Q03085 281 aa8.6□□□□□ -1.03
RPD3YNL330C RPN9Q04062 393 aaKnown RBP8.6□□□□□ -1.03
RPD3YNL330C ESC8Q08119 714 aa8.6□□□□□ -1.03
RPD3YNL330C PGC1Q08959 321 aa8.6□□□□□ -1.03
RPD3YNL330C ICL2Q12031 575 aa8.6□□□□□ -1.03
RPD3YNL330C YPL247CQ12523 523 aa8.6□□□□□ -1.03
RPD3YNL330C TRP3P00937 484 aa8.59□□□□□ -1.03
RPD3YNL330C COR1P07256 457 aa8.59□□□□□ -1.03
RPD3YNL330C CIT2P08679 460 aa8.59□□□□□ -1.03
RPD3YNL330C KSS1P14681 368 aa8.59□□□□□ -1.03
RPD3YNL330C NSP1P14907 823 aaKnown RBP8.59□□□□□ -1.03
RPD3YNL330C CCA1P21269 546 aa8.59□□□□□ -1.03
RPD3YNL330C CLB2P24869 491 aa8.59□□□□□ -1.03
RPD3YNL330C BRF1P29056 596 aa8.59□□□□□ -1.03
RPD3YNL330C CDC3P32457 520 aaKnown RBP8.59□□□□□ -1.03
RPD3YNL330C NPL6P32832 435 aa8.59□□□□□ -1.03
RPD3YNL330C PEX6P33760 1030 aa8.59□□□□□ -1.03
RPD3YNL330C KAP104P38217 918 aaKnown RBP8.59□□□□□ -1.03
RPD3YNL330C YHR131CP38835 850 aa8.59□□□□□ -1.03
RPD3YNL330C FHL1P39521 936 aa8.59□□□□□ -1.03
RPD3YNL330C ECM10P39987 644 aa8.59□□□□□ -1.03
RPD3YNL330C VHR1P40522 640 aa8.59□□□□□ -1.03
RPD3YNL330C MPS3P47069 682 aa8.59□□□□□ -1.03
RPD3YNL330C MRX6P48564 524 aa8.59□□□□□ -1.03
RPD3YNL330C MRK1P50873 501 aa8.59□□□□□ -1.03
RPD3YNL330C BOL2P53082 120 aa8.59□□□□□ -1.03
RPD3YNL330C DSL1P53847 754 aa8.59□□□□□ -1.03
RPD3YNL330C YNL033WP53964 284 aa8.59□□□□□ -1.03
RPD3YNL330C EFM6P53970 246 aa8.59□□□□□ -1.03
RPD3YNL330C YNL019CP53975 284 aa8.59□□□□□ -1.03
RPD3YNL330C ECM9Q02202 377 aa8.59□□□□□ -1.03
RPD3YNL330C SVL3Q03088 825 aaKnown RBP8.59□□□□□ -1.03
RPD3YNL330C MMT1Q03218 510 aa8.59□□□□□ -1.03
RPD3YNL330C YLR225CQ05948 407 aaKnown RBP8.59□□□□□ -1.03
RPD3YNL330C CRN1Q06440 651 aa8.59□□□□□ -1.03
RPD3YNL330C ECM30Q06673 1274 aa8.59□□□□□ -1.03
RPD3YNL330C YLR413WQ06689 675 aa8.59□□□□□ -1.03
RPD3YNL330C LDB18Q07887 179 aa8.59□□□□□ -1.03
RPD3YNL330C UBX3Q12229 455 aa8.59□□□□□ -1.03
RPD3YNL330C HAP2P06774 265 aa8.58□□□□□ -1.04
RPD3YNL330C ABF1P14164 731 aa8.58□□□□□ -1.04
RPD3YNL330C FBA1P14540 359 aaKnown RBP8.58□□□□□ -1.04
RPD3YNL330C FAR1P21268 830 aa8.58□□□□□ -1.04
RPD3YNL330C BUB2P26448 306 aaPredicted RBP8.58□□□□□ -1.04
RPD3YNL330C SSE2P32590 693 aaKnown RBP8.58□□□□□ -1.04
RPD3YNL330C PEP12P32854 288 aa8.58□□□□□ -1.04
RPD3YNL330C FRE2P36033 711 aa8.58□□□□□ -1.04
RPD3YNL330C YBR241CP38142 488 aa8.58□□□□□ -1.04
RPD3YNL330C YHL041WP38730 149 aa8.58□□□□□ -1.04
RPD3YNL330C MUP3P38734 546 aa8.58□□□□□ -1.04
RPD3YNL330C SFB3P38810 929 aa8.58□□□□□ -1.04
RPD3YNL330C DSS1P39112 969 aa8.58□□□□□ -1.04
RPD3YNL330C IES5P40060 125 aa8.58□□□□□ -1.04
RPD3YNL330C ESL1P40456 1118 aa8.58□□□□□ -1.04
RPD3YNL330C VNX1P42839 908 aa8.58□□□□□ -1.04
RPD3YNL330C RTT101P47050 842 aa8.58□□□□□ -1.04
RPD3YNL330C PEX21P50091 288 aa8.58□□□□□ -1.04
RPD3YNL330C EFM5P53200 248 aaKnown RBP8.58□□□□□ -1.04
RPD3YNL330C YGR053CP53234 283 aa8.58□□□□□ -1.04
RPD3YNL330C MTD1Q02046 320 aaKnown RBP8.58□□□□□ -1.04
RPD3YNL330C SPP1Q03012 353 aa8.58□□□□□ -1.04
RPD3YNL330C YDR239CQ03780 787 aa8.58□□□□□ -1.04
RPD3YNL330C YDR131CQ03899 556 aa8.58□□□□□ -1.04
RPD3YNL330C YCS4Q06156 1176 aa8.58□□□□□ -1.04
RPD3YNL330C SVS1Q12254 260 aa8.58□□□□□ -1.04
RPD3YNL330C NTO1Q12311 748 aa8.58□□□□□ -1.04
RPD3YNL330C CBP2P03874 630 aaPredicted RBP8.57□□□□□ -1.04
RPD3YNL330C ACO1P19414 778 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
RPD3YNL330C PMA2P19657 947 aa8.57□□□□□ -1.04
RPD3YNL330C AAT2P23542 418 aaKnown RBP8.57□□□□□ -1.04
RPD3YNL330C RPC82P32349 654 aa8.57□□□□□ -1.04
RPD3YNL330C KAR9P32526 644 aa8.57□□□□□ -1.04
RPD3YNL330C UTP11P34247 250 aaPredicted RBP8.57□□□□□ -1.04
RPD3YNL330C FES1P38260 290 aa8.57□□□□□ -1.04
RPD3YNL330C YHL012WP38709 493 aa8.57□□□□□ -1.04
RPD3YNL330C BRL1P38770 471 aa8.57□□□□□ -1.04
RPD3YNL330C YJR107WP47145 328 aa8.57□□□□□ -1.04
RPD3YNL330C MTR3P48240 250 aaPredicted RBP8.57□□□□□ -1.04
RPD3YNL330C RMR1P53060 241 aa8.57□□□□□ -1.04
RPD3YNL330C YNL095CP53932 642 aa8.57□□□□□ -1.04
RPD3YNL330C PRP38Q00723 242 aaPredicted RBP8.57□□□□□ -1.04
RPD3YNL330C SPP2Q02521 185 aa8.57□□□□□ -1.04
RPD3YNL330C GAS3Q03655 524 aa8.57□□□□□ -1.04
RPD3YNL330C BLS1Q06071 122 aa8.57□□□□□ -1.04
RPD3YNL330C UAF30Q08747 228 aa8.57□□□□□ -1.04
RPD3YNL330C NUS1Q12063 375 aa8.57□□□□□ -1.04
RPD3YNL330C AHA1Q12449 350 aaKnown RBP8.57□□□□□ -1.04
RPD3YNL330C LDB19Q12502 818 aa8.57□□□□□ -1.04
RPD3YNL330C PHO81P17442 1178 aa8.56□□□□□ -1.04
RPD3YNL330C UGA1P17649 471 aa8.56□□□□□ -1.04
RPD3YNL330C FUB1P25659 250 aa8.56□□□□□ -1.04
RPD3YNL330C RAD27P26793 382 aa8.56□□□□□ -1.04
RPD3YNL330C DSS4P32601 143 aa8.56□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms