RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C BEM2P39960 2167 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C RPL27AP0C2H6 136 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C RPL27BP0C2H7 136 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C GAL11P19659 1081 aa2.33□□□□□ -2.04
CSF1YLR087C TAT1P38085 619 aa2.33□□□□□ -2.04
CSF1YLR087C LDH1P38139 375 aa2.33□□□□□ -2.04
CSF1YLR087C YIL108WP40483 696 aaKnown RBP2.33□□□□□ -2.04
CSF1YLR087C FIG4P42837 879 aa2.33□□□□□ -2.04
CSF1YLR087C YJL045WP47052 634 aa2.33□□□□□ -2.04
CSF1YLR087C COG7P53195 279 aa2.33□□□□□ -2.04
CSF1YLR087C JIP5Q06214 492 aaPredicted RBP2.33□□□□□ -2.04
CSF1YLR087C RPI1P23250 407 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C CLB2P24869 491 aa2.32□□□□□ -2.04
CSF1YLR087C KIN82P25341 720 aa2.32□□□□□ -2.04
CSF1YLR087C VMA6P32366 345 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C MNN2P38069 597 aa2.32□□□□□ -2.04
CSF1YLR087C MAL32P38158 584 aa2.32□□□□□ -2.04
CSF1YLR087C ERV15P38312 142 aa2.32□□□□□ -2.04
CSF1YLR087C MNL1P38888 796 aa2.32□□□□□ -2.04
CSF1YLR087C DAK2P43550 591 aa2.32□□□□□ -2.04
CSF1YLR087C OKP1P53298 406 aa2.32□□□□□ -2.04
CSF1YLR087C MAL12P53341 584 aa2.32□□□□□ -2.04
CSF1YLR087C ABZ2Q03266 374 aa2.32□□□□□ -2.04
CSF1YLR087C TRE2Q08693 809 aa2.32□□□□□ -2.04
CSF1YLR087C RTT10Q08924 1013 aa2.32□□□□□ -2.04
CSF1YLR087C UIP4Q08926 304 aa2.32□□□□□ -2.04
CSF1YLR087C GET3Q12154 354 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C MDM32Q12171 622 aa2.32□□□□□ -2.04
CSF1YLR087C SPS2P08459 502 aa2.32□□□□□ -2.04
CSF1YLR087C HEM15P16622 393 aa2.32□□□□□ -2.04
CSF1YLR087C YDJ1P25491 409 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C ILV6P25605 309 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C PDC2P32896 925 aa2.32□□□□□ -2.04
CSF1YLR087C MRPL24P36525 258 aaPredicted RBP2.32□□□□□ -2.04
CSF1YLR087C XDJ1P39102 459 aa2.32□□□□□ -2.04
CSF1YLR087C VAB2P40003 282 aa2.32□□□□□ -2.04
CSF1YLR087C SPG5P42933 373 aa2.32□□□□□ -2.04
CSF1YLR087C NUP85P46673 744 aa2.32□□□□□ -2.04
CSF1YLR087C NMA2P53204 395 aa2.32□□□□□ -2.04
CSF1YLR087C YGR026WP53217 278 aa2.32□□□□□ -2.04
CSF1YLR087C NQM1P53228 333 aaPredicted RBP2.32□□□□□ -2.04
CSF1YLR087C SLT2Q00772 484 aa2.32□□□□□ -2.04
CSF1YLR087C MMT1Q03218 510 aa2.32□□□□□ -2.04
CSF1YLR087C PMT7Q06644 662 aa2.32□□□□□ -2.04
CSF1YLR087C SWC7Q06707 132 aa2.32□□□□□ -2.04
CSF1YLR087C POM152P39685 1337 aa2.32□□□□□ -2.04
CSF1YLR087C PDA1P16387 420 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C HPR1P17629 752 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C EPT1P22140 391 aa2.32□□□□□ -2.04
CSF1YLR087C IFM1P25038 676 aa2.32□□□□□ -2.04
CSF1YLR087C SRO9P25567 434 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C PEP3P27801 918 aa2.32□□□□□ -2.04
CSF1YLR087C SPT23P35210 1082 aa2.32□□□□□ -2.04
CSF1YLR087C MRPL11P36521 249 aaPredicted RBP2.32□□□□□ -2.04
CSF1YLR087C AKL1P38080 1108 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C DED81P38707 554 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C STB2P46679 850 aa2.32□□□□□ -2.04
CSF1YLR087C LYS4P49367 693 aaPredicted RBP2.32□□□□□ -2.04
CSF1YLR087C ATG16Q03818 150 aa2.32□□□□□ -2.04
CSF1YLR087C PKR1Q03880 122 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C INM2Q05533 292 aa2.32□□□□□ -2.04
CSF1YLR087C ALR1Q08269 859 aa2.32□□□□□ -2.04
CSF1YLR087C BTS1Q12051 335 aa2.32□□□□□ -2.04
CSF1YLR087C YOL107WQ12239 342 aa2.32□□□□□ -2.04
CSF1YLR087C SNU23Q12368 194 aaPredicted RBP2.32□□□□□ -2.04
CSF1YLR087C HAP2P06774 265 aa2.32□□□□□ -2.04
CSF1YLR087C ABD1P32783 436 aaPredicted RBP2.32□□□□□ -2.04
CSF1YLR087C NGR1P32831 672 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C PDR3P33200 976 aa2.32□□□□□ -2.04
CSF1YLR087C SHP1P34223 423 aa2.32□□□□□ -2.04
CSF1YLR087C SEF1P34228 1148 aa2.32□□□□□ -2.04
CSF1YLR087C MIF2P35201 549 aa2.32□□□□□ -2.04
CSF1YLR087C MBA1P38300 278 aa2.32□□□□□ -2.04
CSF1YLR087C SSP1P38871 571 aa2.32□□□□□ -2.04
CSF1YLR087C REV7P38927 245 aa2.32□□□□□ -2.04
CSF1YLR087C GSM1P42950 618 aa2.32□□□□□ -2.04
CSF1YLR087C SQS1P53866 767 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C YNL010WP53981 241 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C RPN4Q03465 531 aa2.32□□□□□ -2.04
CSF1YLR087C NSE3Q05541 303 aa2.32□□□□□ -2.04
CSF1YLR087C YPR127WQ06494 345 aa2.32□□□□□ -2.04
CSF1YLR087C YLR125WQ12138 136 aa2.32□□□□□ -2.04
CSF1YLR087C SAT4P25333 603 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C FLO10P36170 1169 aa2.32□□□□□ -2.04
CSF1YLR087C EDS1P38073 919 aa2.32□□□□□ -2.04
CSF1YLR087C GYP8P43570 497 aa2.32□□□□□ -2.04
CSF1YLR087C MIG2P53035 382 aa2.32□□□□□ -2.04
CSF1YLR087C YGL114WP53134 725 aa2.32□□□□□ -2.04
CSF1YLR087C ORC4P54791 529 aa2.32□□□□□ -2.04
CSF1YLR087C HER2Q03557 464 aa2.32□□□□□ -2.04
CSF1YLR087C MRX10Q05648 414 aa2.32□□□□□ -2.04
CSF1YLR087C VID22Q05934 901 aa2.32□□□□□ -2.04
CSF1YLR087C TOS4Q06266 489 aa2.32□□□□□ -2.04
CSF1YLR087C AIM6Q07716 390 aa2.32□□□□□ -2.04
CSF1YLR087C YCT1Q12235 531 aa2.32□□□□□ -2.04
CSF1YLR087C VCX1Q99385 411 aa2.32□□□□□ -2.04
CSF1YLR087C ART10P18634 518 aaKnown RBP2.32□□□□□ -2.04
CSF1YLR087C ATG22P25568 528 aa2.32□□□□□ -2.04
CSF1YLR087C CWH43P25618 953 aa2.32□□□□□ -2.04
CSF1YLR087C HOG1P32485 435 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms