RNA–Protein interactions for RNA: YLL002W

RTT109, Transcript of Histone acetyltransferase, yeast

Gene RTT109, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTT109	YLL002W	YLF2	P38746	405 aa		3.78	□□□□□ -1.8
RTT109	YLL002W	CTM1	P38818	585 aa		3.78	□□□□□ -1.8
RTT109	YLL002W	IMA5	P40884	581 aa		3.78	□□□□□ -1.8
RTT109	YLL002W	TEP1	P53916	434 aa		3.78	□□□□□ -1.8
RTT109	YLL002W	CEG1	Q01159	459 aa	Predicted RBP	3.78	□□□□□ -1.8
RTT109	YLL002W	FMP30	Q02883	468 aa		3.78	□□□□□ -1.8
RTT109	YLL002W	NGL3	Q03210	505 aa		3.78	□□□□□ -1.8
RTT109	YLL002W	SLK19	Q08581	821 aa	Known RBP	3.78	□□□□□ -1.8
RTT109	YLL002W	NEW1	Q08972	1196 aa	Known RBP	3.78	□□□□□ -1.8
RTT109	YLL002W	RRP6	Q12149	733 aa	Known RBP	3.78	□□□□□ -1.8
RTT109	YLL002W	SUT2	Q12286	268 aa		3.78	□□□□□ -1.8
RTT109	YLL002W	CDC37	P06101	506 aa	Known RBP	3.77	□□□□□ -1.81
RTT109	YLL002W	PIF1	P07271	859 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	WHI2	P12611	486 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	SPO12	P17123	173 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	PHO81	P17442	1178 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	VPS34	P22543	875 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	MCM3	P24279	971 aa	Known RBP	3.77	□□□□□ -1.81
RTT109	YLL002W	MRPL9	P31334	269 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	RAD5	P32849	1169 aa	Predicted RBP	3.77	□□□□□ -1.81
RTT109	YLL002W	CUE2	P36075	443 aa	Known RBP	3.77	□□□□□ -1.81
RTT109	YLL002W	PSF2	P40359	213 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	MAD3	P47074	515 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	MRK1	P50873	501 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	COQ6	P53318	479 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	CPR8	P53728	308 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	SEC5	P89102	971 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	RPS15	Q01855	142 aa	Known RBP	3.77	□□□□□ -1.81
RTT109	YLL002W	VPS64	Q03944	604 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	ERV41	Q04651	352 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	YLR287C	Q05881	355 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	CRD1	Q07560	283 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	ULA1	Q12059	462 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	SLM3	Q12093	417 aa		3.77	□□□□□ -1.81
RTT109	YLL002W	GET3	Q12154	354 aa	Known RBP	3.77	□□□□□ -1.81
RTT109	YLL002W	JIP3	O13555	125 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	YPK1	P12688	680 aa	Known RBP	3.76	□□□□□ -1.81
RTT109	YLL002W	RNR3	P21672	869 aa	Known RBP	3.76	□□□□□ -1.81
RTT109	YLL002W	PUP2	P32379	260 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	HXT1	P32465	570 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	PEX2	P32800	271 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	BMH2	P34730	273 aa	Known RBP	3.76	□□□□□ -1.81
RTT109	YLL002W	APM3	P38153	483 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	PFF1	P38244	976 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	PUS4	P48567	403 aa	Known RBP	3.76	□□□□□ -1.81
RTT109	YLL002W	COS12	P53053	380 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	ADE16	P54113	591 aa	Known RBP	3.76	□□□□□ -1.81
RTT109	YLL002W	ACS1	Q01574	713 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	ADA2	Q02336	434 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	YML119W	Q03208	357 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	TRS31	Q03337	283 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	UBX2	Q04228	584 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	VTI1	Q04338	217 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	ENT2	Q05785	613 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	YLR177W	Q06251	628 aa		3.76	□□□□□ -1.81
RTT109	YLL002W	ABP140	Q08641	628 aa	Known RBP	3.76	□□□□□ -1.81
RTT109	YLL002W	PMD1	P32634	1753 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	SUP35	P05453	685 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	RPB2	P08518	1224 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	TUB1	P09733	447 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	KAR3	P17119	729 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	SEC18	P18759	758 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	CLB4	P24871	460 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	SWI4	P25302	1093 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	ILV6	P25605	309 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	BUD14	P27637	709 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	YMC1	P32331	307 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	GCG1	P32656	232 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	LOS1	P33418	1100 aa	Predicted RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	LAS1	P36146	502 aa	Predicted RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	SDH8	P38345	138 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	MTG2	P38860	518 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	YMR124W	P39523	943 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	YMR147W	P40218	223 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	FAF1	P40546	346 aa	Predicted RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	QRI7	P43122	407 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	YFL040W	P43562	540 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	AIP1	P46680	615 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	RRT6	P53117	311 aa	Predicted RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	YGL117W	P53133	265 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	RTS3	P53289	263 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	EBS1	Q03466	884 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	USA1	Q03714	838 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	ARA2	Q04212	335 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	MRD1	Q06106	887 aa	Known RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	MMR1	Q06324	491 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	SPN1	Q06505	410 aa	Predicted RBP	3.75	□□□□□ -1.81
RTT109	YLL002W	AAD4	Q07747	329 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	CRT10	Q08226	957 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	TAH18	Q12181	623 aa		3.75	□□□□□ -1.81
RTT109	YLL002W	ARG4	P04076	463 aa	Predicted RBP	3.74	□□□□□ -1.81
RTT109	YLL002W	HEM1	P09950	548 aa	Predicted RBP	3.74	□□□□□ -1.81
RTT109	YLL002W	GCD2	P12754	651 aa	Predicted RBP	3.74	□□□□□ -1.81
RTT109	YLL002W	VPS1	P21576	704 aa	Known RBP	3.74	□□□□□ -1.81
RTT109	YLL002W	MSM1	P22438	575 aa		3.74	□□□□□ -1.81
RTT109	YLL002W	AAD3	P25612	363 aa		3.74	□□□□□ -1.81
RTT109	YLL002W	PRE2	P30656	287 aa	Known RBP	3.74	□□□□□ -1.81
RTT109	YLL002W	TFC3	P34111	1160 aa		3.74	□□□□□ -1.81
RTT109	YLL002W	SPP381	P38282	291 aa	Predicted RBP	3.74	□□□□□ -1.81
RTT109	YLL002W	PAC2	P39937	518 aa		3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms