RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W SAM4Q08985 325 aaKnown RBP5.06□□□□□ -1.6
MSH1YHR120W RPL40AP0CH08 128 aaKnown RBP5.05□□□□□ -1.6
MSH1YHR120W RPL40BP0CH09 128 aaKnown RBP5.05□□□□□ -1.6
MSH1YHR120W URA4P20051 364 aa5.05□□□□□ -1.6
MSH1YHR120W CHL1P22516 861 aaPredicted RBP5.05□□□□□ -1.6
MSH1YHR120W CDC20P26309 610 aa5.05□□□□□ -1.6
MSH1YHR120W DPH5P32469 300 aaPredicted RBP5.05□□□□□ -1.6
MSH1YHR120W TFB1P32776 642 aa5.05□□□□□ -1.6
MSH1YHR120W BCK2P33306 851 aa5.05□□□□□ -1.6
MSH1YHR120W SCD5P34758 872 aa5.05□□□□□ -1.6
MSH1YHR120W YBP1P38315 674 aa5.05□□□□□ -1.6
MSH1YHR120W PFS1P38872 237 aa5.05□□□□□ -1.6
MSH1YHR120W HOS4P40480 1083 aa5.05□□□□□ -1.6
MSH1YHR120W RPL34BP40525 121 aaKnown RBP5.05□□□□□ -1.6
MSH1YHR120W DIM1P41819 318 aaKnown RBP5.05□□□□□ -1.6
MSH1YHR120W IML2P47031 731 aa5.05□□□□□ -1.6
MSH1YHR120W DAN4P47179 1161 aa5.05□□□□□ -1.6
MSH1YHR120W MTO1P53070 669 aa5.05□□□□□ -1.6
MSH1YHR120W SPC105P53148 917 aa5.05□□□□□ -1.6
MSH1YHR120W YPR003CP53394 754 aa5.05□□□□□ -1.6
MSH1YHR120W SIW14P53965 281 aa5.05□□□□□ -1.6
MSH1YHR120W CDC14Q00684 551 aa5.05□□□□□ -1.6
MSH1YHR120W PIN2Q12057 282 aa5.05□□□□□ -1.6
MSH1YHR120W UBR1P19812 1950 aa5.05□□□□□ -1.6
MSH1YHR120W CLN1P20437 546 aa5.05□□□□□ -1.6
MSH1YHR120W RPC19P28000 142 aaKnown RBP5.05□□□□□ -1.6
MSH1YHR120W BRF1P29056 596 aa5.05□□□□□ -1.6
MSH1YHR120W AST1P35183 429 aa5.05□□□□□ -1.6
MSH1YHR120W IRS4P36115 615 aaKnown RBP5.05□□□□□ -1.6
MSH1YHR120W CTP1P38152 299 aa5.05□□□□□ -1.6
MSH1YHR120W SIP4P46954 829 aa5.05□□□□□ -1.6
MSH1YHR120W MET14Q02196 202 aa5.05□□□□□ -1.6
MSH1YHR120W YMR178WQ03219 274 aaKnown RBP5.05□□□□□ -1.6
MSH1YHR120W YMR160WQ03823 816 aa5.05□□□□□ -1.6
MSH1YHR120W RSA3Q05942 220 aaKnown RBP5.05□□□□□ -1.6
MSH1YHR120W GET4Q12125 312 aa5.05□□□□□ -1.6
MSH1YHR120W NAG1Q8TGN9 163 aa5.05□□□□□ -1.6
MSH1YHR120W Q0182Q9ZZW1 134 aa5.05□□□□□ -1.6
MSH1YHR120W TOR1P35169 2470 aa5.04□□□□□ -1.6
MSH1YHR120W MPH2P0CD99 609 aa5.04□□□□□ -1.6
MSH1YHR120W AEP1P32493 518 aa5.04□□□□□ -1.6
MSH1YHR120W CUE2P36075 443 aaKnown RBP5.04□□□□□ -1.6
MSH1YHR120W FRT2P39734 528 aa5.04□□□□□ -1.6
MSH1YHR120W TIF34P40217 347 aaKnown RBP5.04□□□□□ -1.6
MSH1YHR120W SET2P46995 733 aaKnown RBP5.04□□□□□ -1.6
MSH1YHR120W CSN12P47130 423 aa5.04□□□□□ -1.6
MSH1YHR120W BIO4P53630 237 aa5.04□□□□□ -1.6
MSH1YHR120W TVP15Q03860 143 aa5.04□□□□□ -1.6
MSH1YHR120W PPN1Q04119 674 aa5.04□□□□□ -1.6
MSH1YHR120W YET3Q07451 203 aa5.04□□□□□ -1.6
MSH1YHR120W YOR338WQ99326 363 aa5.04□□□□□ -1.6
MSH1YHR120W TEF1P02994 458 aaKnown RBP5.04□□□□□ -1.6
MSH1YHR120W GPA2P10823 449 aa5.04□□□□□ -1.6
MSH1YHR120W STE6P12866 1290 aa5.04□□□□□ -1.6
MSH1YHR120W AMS1P22855 1083 aa5.04□□□□□ -1.6
MSH1YHR120W TSR4P25040 408 aa5.04□□□□□ -1.6
MSH1YHR120W RAD51P25454 400 aa5.04□□□□□ -1.6
MSH1YHR120W DCC1P25559 380 aa5.04□□□□□ -1.6
MSH1YHR120W AAD3P25612 363 aa5.04□□□□□ -1.6
MSH1YHR120W VPH2P32341 215 aa5.04□□□□□ -1.6
MSH1YHR120W BEM3P32873 1128 aa5.04□□□□□ -1.6
MSH1YHR120W HES1P35843 434 aa5.04□□□□□ -1.6
MSH1YHR120W TFA2P36145 328 aa5.04□□□□□ -1.6
MSH1YHR120W RIM2P38127 377 aa5.04□□□□□ -1.6
MSH1YHR120W TAE1P38340 232 aa5.04□□□□□ -1.6
MSH1YHR120W SSP120P39931 234 aaKnown RBP5.04□□□□□ -1.6
MSH1YHR120W SUM1P46676 1062 aa5.04□□□□□ -1.6
MSH1YHR120W TAH11P47112 604 aa5.04□□□□□ -1.6
MSH1YHR120W MNN10P50108 393 aaKnown RBP5.04□□□□□ -1.6
MSH1YHR120W COG1P53079 417 aa5.04□□□□□ -1.6
MSH1YHR120W RLI1Q03195 608 aaKnown RBP5.04□□□□□ -1.6
MSH1YHR120W YKU80Q04437 629 aa5.04□□□□□ -1.6
MSH1YHR120W RRP36Q12481 300 aaPredicted RBP5.04□□□□□ -1.6
MSH1YHR120W YLR149CQ99296 730 aa5.04□□□□□ -1.6
MSH1YHR120W SEN1Q00416 2231 aaKnown RBP5.04□□□□□ -1.6
MSH1YHR120W IRA2P19158 3079 aa5.03□□□□□ -1.6
MSH1YHR120W SRP101P32916 621 aa5.03□□□□□ -1.6
MSH1YHR120W NUP120P35729 1037 aa5.03□□□□□ -1.6
MSH1YHR120W YKL151CP36059 337 aa5.03□□□□□ -1.6
MSH1YHR120W DPH1P40487 425 aaKnown RBP5.03□□□□□ -1.6
MSH1YHR120W SNO2P53823 222 aa5.03□□□□□ -1.6
MSH1YHR120W RSC4Q02206 625 aa5.03□□□□□ -1.6
MSH1YHR120W RPM2Q02773 1202 aa5.03□□□□□ -1.6
MSH1YHR120W ACL4Q03771 387 aa5.03□□□□□ -1.6
MSH1YHR120W YDR131CQ03899 556 aa5.03□□□□□ -1.6
MSH1YHR120W ERR1P0CX10 437 aa5.03□□□□□ -1.6
MSH1YHR120W ERR2P0CX11 437 aa5.03□□□□□ -1.6
MSH1YHR120W YAK1P14680 807 aa5.03□□□□□ -1.6
MSH1YHR120W PRP6P19735 899 aaPredicted RBP5.03□□□□□ -1.6
MSH1YHR120W MSB1P21339 1137 aaKnown RBP5.03□□□□□ -1.6
MSH1YHR120W HEM3P28789 327 aa5.03□□□□□ -1.6
MSH1YHR120W HEM12P32347 362 aaPredicted RBP5.03□□□□□ -1.6
MSH1YHR120W SCS2P40075 244 aaKnown RBP5.03□□□□□ -1.6
MSH1YHR120W TES1P41903 349 aaKnown RBP5.03□□□□□ -1.6
MSH1YHR120W ERR3P42222 437 aa5.03□□□□□ -1.6
MSH1YHR120W NBP35P52920 328 aa5.03□□□□□ -1.6
MSH1YHR120W SAP4P53036 818 aa5.03□□□□□ -1.6
MSH1YHR120W NUP100Q02629 959 aa5.03□□□□□ -1.6
MSH1YHR120W SLU7Q02775 382 aaKnown RBP5.03□□□□□ -1.6
MSH1YHR120W YPL113CQ02961 396 aa5.03□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms