RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W KAR4P25583 335 aa3.53□□□□□ -1.84
BCD1YHR040W CMK1P27466 446 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W NIP1P32497 812 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W VMA8P32610 256 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W NPL6P32832 435 aa3.53□□□□□ -1.84
BCD1YHR040W RAD5P32849 1169 aaPredicted RBP3.53□□□□□ -1.84
BCD1YHR040W SLC1P33333 303 aa3.53□□□□□ -1.84
BCD1YHR040W SHP1P34223 423 aa3.53□□□□□ -1.84
BCD1YHR040W PXA2P34230 853 aa3.53□□□□□ -1.84
BCD1YHR040W MSG5P38590 489 aa3.53□□□□□ -1.84
BCD1YHR040W STL1P39932 569 aa3.53□□□□□ -1.84
BCD1YHR040W ZRG8P40021 1076 aa3.53□□□□□ -1.84
BCD1YHR040W SMX2P40204 77 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W RIC1P40395 1056 aa3.53□□□□□ -1.84
BCD1YHR040W YNL320WP42840 284 aa3.53□□□□□ -1.84
BCD1YHR040W IRC6P43615 237 aa3.53□□□□□ -1.84
BCD1YHR040W URB2P47108 1174 aa3.53□□□□□ -1.84
BCD1YHR040W BFA1P47113 574 aa3.53□□□□□ -1.84
BCD1YHR040W YJR054WP47114 497 aa3.53□□□□□ -1.84
BCD1YHR040W SPT20P50875 604 aa3.53□□□□□ -1.84
BCD1YHR040W GTF1P53260 183 aaPredicted RBP3.53□□□□□ -1.84
BCD1YHR040W KTR5P53966 522 aaPredicted RBP3.53□□□□□ -1.84
BCD1YHR040W MTD1Q02046 320 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W MRPL13Q02204 264 aa3.53□□□□□ -1.84
BCD1YHR040W DIG1Q03063 452 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W YMR102CQ03177 834 aa3.53□□□□□ -1.84
BCD1YHR040W LRS4Q04087 347 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W SIZ1Q04195 904 aa3.53□□□□□ -1.84
BCD1YHR040W SPC24Q04477 213 aa3.53□□□□□ -1.84
BCD1YHR040W PRM6Q04705 352 aa3.53□□□□□ -1.84
BCD1YHR040W YDR222WQ04925 415 aa3.53□□□□□ -1.84
BCD1YHR040W FAR8Q05040 523 aa3.53□□□□□ -1.84
BCD1YHR040W SFH1Q06168 426 aa3.53□□□□□ -1.84
BCD1YHR040W CDA2Q06703 312 aa3.53□□□□□ -1.84
BCD1YHR040W XYL2Q07993 356 aa3.53□□□□□ -1.84
BCD1YHR040W ABP140Q08641 628 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W RIB2Q12362 591 aaKnown RBP3.53□□□□□ -1.84
BCD1YHR040W PCD1Q12524 340 aa3.53□□□□□ -1.84
BCD1YHR040W ARG4P04076 463 aaPredicted RBP3.52□□□□□ -1.85
BCD1YHR040W ASP3-2P0CX77 362 aa3.52□□□□□ -1.85
BCD1YHR040W ASP3-3P0CX78 362 aa3.52□□□□□ -1.85
BCD1YHR040W ASP3-4P0CX79 362 aa3.52□□□□□ -1.85
BCD1YHR040W ASP3-1P0CZ17 362 aa3.52□□□□□ -1.85
BCD1YHR040W YPK1P12688 680 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W PRP16P15938 1071 aaPredicted RBP3.52□□□□□ -1.85
BCD1YHR040W CDC42P19073 191 aa3.52□□□□□ -1.85
BCD1YHR040W RNR1P21524 888 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W RFA1P22336 621 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W KIN82P25341 720 aa3.52□□□□□ -1.85
BCD1YHR040W YCL002CP25565 263 aa3.52□□□□□ -1.85
BCD1YHR040W EFB1P32471 206 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W TSA1P34760 196 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W SET3P36124 751 aa3.52□□□□□ -1.85
BCD1YHR040W HEK2P38199 381 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
BCD1YHR040W VID24P38263 362 aa3.52□□□□□ -1.85
BCD1YHR040W UBS1P38290 277 aa3.52□□□□□ -1.85
BCD1YHR040W SWC5P38326 303 aa3.52□□□□□ -1.85
BCD1YHR040W YHR054CP38780 354 aa3.52□□□□□ -1.85
BCD1YHR040W BEM4P39011 633 aa3.52□□□□□ -1.85
BCD1YHR040W MEF2P39677 819 aa3.52□□□□□ -1.85
BCD1YHR040W SSP120P39931 234 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W TMN3P40071 706 aa3.52□□□□□ -1.85
BCD1YHR040W RIO2P40160 425 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W ARG2P40360 574 aa3.52□□□□□ -1.85
BCD1YHR040W SHR5P41912 237 aa3.52□□□□□ -1.85
BCD1YHR040W SNZ3P43545 298 aa3.52□□□□□ -1.85
BCD1YHR040W YFL052WP43551 465 aa3.52□□□□□ -1.85
BCD1YHR040W IRC5P43610 853 aa3.52□□□□□ -1.85
BCD1YHR040W RPS0BP46654 252 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W NMD5P46970 1048 aa3.52□□□□□ -1.85
BCD1YHR040W ILM1P47155 203 aa3.52□□□□□ -1.85
BCD1YHR040W ORC5P50874 479 aa3.52□□□□□ -1.85
BCD1YHR040W NCS6P53088 359 aa3.52□□□□□ -1.85
BCD1YHR040W MND1P53102 219 aa3.52□□□□□ -1.85
BCD1YHR040W RBG2P53295 368 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W LSC1P53598 329 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W SNZ2P53824 298 aa3.52□□□□□ -1.85
BCD1YHR040W SFB2P53953 876 aa3.52□□□□□ -1.85
BCD1YHR040W CWC21Q03375 135 aaKnown RBP3.52□□□□□ -1.85
BCD1YHR040W PPM1Q04081 328 aa3.52□□□□□ -1.85
BCD1YHR040W ARA2Q04212 335 aa3.52□□□□□ -1.85
BCD1YHR040W TAF11Q04226 346 aa3.52□□□□□ -1.85
BCD1YHR040W UFO1Q04511 668 aa3.52□□□□□ -1.85
BCD1YHR040W VID22Q05934 901 aa3.52□□□□□ -1.85
BCD1YHR040W THI7Q05998 598 aa3.52□□□□□ -1.85
BCD1YHR040W YLR455WQ06188 304 aa3.52□□□□□ -1.85
BCD1YHR040W SHS1Q07657 551 aa3.52□□□□□ -1.85
BCD1YHR040W ECM3Q99252 613 aa3.52□□□□□ -1.85
BCD1YHR040W SOD2P00447 233 aa3.51□□□□□ -1.85
BCD1YHR040W YMR085WP0CF18 432 aa3.51□□□□□ -1.85
BCD1YHR040W CDC26P14724 124 aa3.51□□□□□ -1.85
BCD1YHR040W PUT4P15380 627 aa3.51□□□□□ -1.85
BCD1YHR040W MET8P15807 274 aa3.51□□□□□ -1.85
BCD1YHR040W AAC3P18238 307 aa3.51□□□□□ -1.85
BCD1YHR040W FUR1P18562 216 aaKnown RBP3.51□□□□□ -1.85
BCD1YHR040W PRP6P19735 899 aaPredicted RBP3.51□□□□□ -1.85
BCD1YHR040W SLY1P22213 666 aa3.51□□□□□ -1.85
BCD1YHR040W TRX1P22217 103 aaKnown RBP3.51□□□□□ -1.85
BCD1YHR040W PGS1P25578 521 aa3.51□□□□□ -1.85
BCD1YHR040W SEC1P30619 724 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 96.2 ms